Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01965 ATGAGTACGGTTGATAAGATGCTGATCAAGGGCATCCGAAGTTTCGACCCAGAGAATAAGAACGTCATCACCTTCTTCAAACCCTTAACCCTAATCGTCGGTCCCAACGGTGCCGGCAAAACCACAATCATAGAATGCTTGAAGCTTTCATGCACCGGTGAGTTGCCACCAAATGCTAGGTCTGGTCACAGCTTCATTCACGACCCCAAGGTTGCCGGAGAAACGGAAACCAAGGGACAAATTAAGCTCAGGTTTAAAACCGCCGCCGGTAGAGACGTGGTTTGCATAAGATCCTTTCAGCTCACGCAAAAGGCCTCCAAGATGGAATACAAGGCAATTGAGAGTGTGCTTCAAACTATTAATCCTCATTCCGGCGAGAAAGTTTGCCTTAGCTATAGATGCGCTGACATGGATCGAGAGATTCCTGCACTCATGGGTGTTTCAAAGGCCATTTTGGAAAATGTCATTTTCGTTCATCAAGATGAAGCCAATTGGCCACTTCAGGATCCTTCCACGTTAAAGAAGAAGTTTGATGATATCTTTTCGGCAACTCGCAGATACACAAAGGCACTGGAGGTTATAAAGAAACTTCACAAAGATCAAGCTCAAGAGATAAAGACTTACAAGCTGAAACTGGAAAATCTTCAAACTCTGAAAGATGCGGCTTACACGCTTCGGGAAAGCATTGCACAGGATCAAGAGAAAACAGAATCTGTAAAAGGTCAGATACAGCAGTTGGATGGAAGCATTACAGATTTAGATACTAAAATTGATCATGCTGAAAAAACATTGAAACATTTGACAAAGCTAAAGGATGAAATATCAACTAAAACTACACAACGAAGCACTCTATTTAAGGAACAACAGAAGCAATATGCTGCTCTTGCTGAGGAGTATGAAGAAACGGATGAAGAGTTGATGGAATTGAAGTCGCAGTTTGATGAAAGGATTGCAAATTCACAAACACAAATAAATAAGTTGGAAAGAGAGAAGACTGACAATGACACAAAAATTCCTGTCCTTAAGAAGACCATCAATGAGTCTATCTGGGAGATCAGCAAGCTACAAACTGAAGCAGAAGCTCACATGTCTTTGAAGAATGAACGAGATACTTCCATTCAAAGTCTTTTTGCTAGGTATAACTTAGGGTATCTCTCAAAGCCACCCTTCAGTGCTGAGGATGCTTTGAACCTCACTAATCGTTTAAAATCAAGGTTTGGAGATCTTGAGAAGGACGTAGAAGATAAAAAGAAAGCAAATGACACTCAACTCAAGATGGCATGGGATTGCTACTTGAAAGCAAATAAAAGTTGGCAAAATACTGAGGCTAAAATACAAACTAAGAGAGAGATCAAGACTGACATTATAAAGCGCATTGAAGAGAAGAAAAGTGAGCTTGATTCACATGAACTTCAATTATCTAATATTAATTTTTCTCATATAGACGAGAGAGAAAGAGATTTGAAAATTGAACTGGATAGGAAGCATATGCAACTTGCTGAAAGAGAATTTGAACTAAAGAAACATCAAATGGAAAGTGAACTCCTTAATGTAGAGCAAAAGATTAAGGTTGTCAATCGAGAGTTGGTTACCATGGCTACTGATTCAAAGGAGAGAGAGAGATTTTCTATTTTGAAGGGAGACTTGGAGATTCAGAAGAAGAAACATAAAAAGATAATTGATGACCAAAAAGAGAAAATAAGAAGGGTGCTAAAAGGGAGAATTCCTTGTGATAAAGACGTGAAGAAGGAAATCACACAAGCATTAAGGACTGTTGAAGCTGAATATGATGAGCTGAATGCAAAGTACCGGGAAGCTGACAAGGAAGTAAATATTTTGCAGATGAAGATACAAGAAGTTGGCAATAATCTATCTAAACACCACAAGGATATGGAATCAAGAAAAAGATTTATTGACTCCAAGTTTCAGTCTTTGGATCAGCAATATTCTGGAATTGATTCTTTTCTCAAAGTTTTAGAGTCTGCAAAGGAGAAAAGAGATGTACAGAAAAGCAAATATAACATTGCCGATGGCATGCGGCAAATGTTTGATCCATTTGAAAGGGTTGCCAGAGCTCATCATTTTTGCCCTTGCTGTGAGCGTTCTTTCTCGGCAGAAGAAGAAGACAGTTTTGTCCAGAAGCAAAGAGTGAAGGCTGCTAGTTCAGCTGAACATATGAAAGTTCTTGCTGTGGAGTCCTCAAGTGCAGACTCTTATTATCAGCAGTTGGACAAACTTCGTATGGTTTACGAAGAATATGTTAAACTTAAGAAGGAGACAATCCCTAATGCTGAAAAGGAACTCCAGCAAGTCAAGGAAGAGCTGGATCACAAATCCCAGGCACTGGATGATATTTTGGGTGTTTTAGCTCAAGTGAAGACTGACAAGGATTTGGTTGACACAGTGATAAAACCTGTTGAAAAAGCTGATCAACTTTTCCAAGATATTCAAGATTTGCAAAAGAAGATTGAGGAATTAGAATGTAGTCTTGATTTTCGAGGACCAGGAGTGAGAAGTTTGGAAGAAACTCAATCAGAGCTCACTGCATTGCAAGGCACAAAGGACAATTTGAATACTGAGTTGAAGAATTTGATGGAAGAGCAGAAAGATATGGAGAATCGTATATCAACAATTGAAAAACGGTTGTACATTGCAAGGGATGAGAAAACAAATGCAGCTAAGAAATTACAAGATGTTCAAAGATTAGAAGAAGAACTAGAGCGCTTGACAGAAGAAATGACCCAAGTTGATCTTGATGAGAAGAGCCTGGCAGAAGCCATTGGACCTTTATCCAAGCACAAAGATAAAATATTTGCTGACTATAATGAACTGAAAATTAGACTTGACCAAGAGTTTGAGCATCTGGTTGAAAAAAAGAGAATTTATTAG 2889 0.3894 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVAGETETKGQIKLRFKTAAGRDVVCIRSFQLTQKASKMEYKAIESVLQTINPHSGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYTLRESIAQDQEKTESVKGQIQQLDGSITDLDTKIDHAEKTLKHLTKLKDEISTKTTQRSTLFKEQQKQYAALAEEYEETDEELMELKSQFDERIANSQTQINKLEREKTDNDTKIPVLKKTINESIWEISKLQTEAEAHMSLKNERDTSIQSLFARYNLGYLSKPPFSAEDALNLTNRLKSRFGDLEKDVEDKKKANDTQLKMAWDCYLKANKSWQNTEAKIQTKREIKTDIIKRIEEKKSELDSHELQLSNINFSHIDERERDLKIELDRKHMQLAEREFELKKHQMESELLNVEQKIKVVNRELVTMATDSKERERFSILKGDLEIQKKKHKKIIDDQKEKIRRVLKGRIPCDKDVKKEITQALRTVEAEYDELNAKYREADKEVNILQMKIQEVGNNLSKHHKDMESRKRFIDSKFQSLDQQYSGIDSFLKVLESAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHFCPCCERSFSAEEEDSFVQKQRVKAASSAEHMKVLAVESSSADSYYQQLDKLRMVYEEYVKLKKETIPNAEKELQQVKEELDHKSQALDDILGVLAQVKTDKDLVDTVIKPVEKADQLFQDIQDLQKKIEELECSLDFRGPGVRSLEETQSELTALQGTKDNLNTELKNLMEEQKDMENRISTIEKRLYIARDEKTNAAKKLQDVQRLEEELERLTEEMTQVDLDEKSLAEAIGPLSKHKDKIFADYNELKIRLDQEFEHLVEKKRIY 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01965 962 Coils Coil 582 623 - -
Car05g01965 962 Coils Coil 809 829 - -
Car05g01965 962 Coils Coil 198 218 - -
Car05g01965 962 Coils Coil 840 881 - -
Car05g01965 962 Gene3D - 4 294 IPR027417 -
Car05g01965 962 Coils Coil 885 919 - -
Car05g01965 962 Coils Coil 250 277 - -
Car05g01965 962 Coils Coil 285 330 - -
Car05g01965 962 Coils Coil 501 528 - -
Car05g01965 962 CDD ABC_Rad50 4 170 IPR045171 -
Car05g01965 962 Coils Coil 546 566 - -
Car05g01965 962 Coils Coil 754 781 - -
Car05g01965 962 PANTHER RAD50 1 959 - -
Car05g01965 962 Coils Coil 452 472 - -
Car05g01965 962 Pfam AAA domain 7 237 IPR038729 GO:0140664
Car05g01965 962 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 243 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01965 K10866 - gmx:100818545 1369.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01965 05 64946615 64963429 Car05g01965 05 64946615 64963429 ECH