Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01962 ATGGCTTCTCCACCAGACACAAGCAAAACCATAAAGCTAGAACGTTACAATAGCTACATCAGAAAAGTTAACAGCACAAAGCTTCTAAACGCATCTTCAAAGCTTCTTTTCCGTGCCACACTCTTAATAGCACTCATCCTTGTTTTCCTCTTCACCTTCAATTACCCTCCTCTCTCTGAAACCGCCAACCACCATCTCCACACTCATTCCAATTTCCTCGCATCCGCATTCGGCGGTGGCGGCGCTTGGGAACGACAAGTCCGTCACTCCGCAACACCGCGTCGTCCTAACGGTTTCTCCGTACTGGTAACCGGTGCAGCCGGTTTCGTCGGTAGTCACTGTTCACTCGCTCTTAAAAAACGAGGCGATGGCGTTGTAGGTCTTGATAATTTTAACACCTATTACGACCCGTCGTTGAAACGCGCGAGACAAGCTTTATTAACACAACATCAAATATTCATAGCCGAAGGTGACTTAAACGACACGCCGTTGTTAACTAAACTCTTCGACTTAGTGCCGTTTACTCACATCCTTCACCTCGCTGCACAAGCCGGTGTTCGTTACGCCATGCAGAATCCACAATCTTATATCAAATCAAACATTGCTGGTTTCGTGAATCTTCTTGAAGTTTCCAAAACCGCTAATCCTCAACCGTCCATCGTTTGGGCTTCATCAAGCTCTGTTTACGGTCTCAACACTGAGAATCCGTTTTCAGAACTTCACCGGACTGATCAACCTGCGAGTCTCTACGCCGCTACTAAAAAAGCCGGCGAGGAAATCGCGCATACATATAATCATATCTACGGTTTATCTCTCACCGGACTCCGATTCTTCACGGTGTACGGTCCATGGGGAAGACCGGACATGGCGTACTTCTTCTTCACGAAGGATATCCTTCACGGGAAAACGGTCGATGTTTACCAGACGCAGGACGGGAAGGAAGTGGCGCGTGATTTCACGTACATCGATGATATCGTGAAAGGATGTGTAGGAGCGTTGGATACGGCGGAGAAGAGTACAGGAAGCGGGGGAAAGAAGCGTGGACCGGCGCAGTTGAGAATTTATAATCTCGGAAACACGTCGCCGGTGCCGGTGGGGAAACTCGTATCGATTTTGGAAAACTTGTTGAGCACGAAGGCGAAGAAACACATCATTAAGATGCCGCGAAACGGTGACGTTCCATACACGCATGCGAATGTAACATTGGCTTACAAAGATTTCGGGTACAAACCTACAACGGATCTTGCAACGGGTCTCAGAAAATTCGTTAAGTGGTATGTTCGTTATTACGGGATTCAGTCGAGGCTAAAAAAGGAAAATCACAATGATAATGAATTACCCGAGGATTCCGCTTGA 1356 0.4735 MASPPDTSKTIKLERYNSYIRKVNSTKLLNASSKLLFRATLLIALILVFLFTFNYPPLSETANHHLHTHSNFLASAFGGGGAWERQVRHSATPRRPNGFSVLVTGAAGFVGSHCSLALKKRGDGVVGLDNFNTYYDPSLKRARQALLTQHQIFIAEGDLNDTPLLTKLFDLVPFTHILHLAAQAGVRYAMQNPQSYIKSNIAGFVNLLEVSKTANPQPSIVWASSSSVYGLNTENPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILHGKTVDVYQTQDGKEVARDFTYIDDIVKGCVGALDTAEKSTGSGGKKRGPAQLRIYNLGNTSPVPVGKLVSILENLLSTKAKKHIIKMPRNGDVPYTHANVTLAYKDFGYKPTTDLATGLRKFVKWYVRYYGIQSRLKKENHNDNELPEDSA 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01962 451 Gene3D - 278 426 - -
Car05g01962 451 PANTHER EPIMERASE-RELATED 1 442 - -
Car05g01962 451 Pfam GDP-mannose 4,6 dehydratase 102 421 IPR016040 -
Car05g01962 451 PANTHER UDP-GLUCURONATE 4-EPIMERASE 6 1 442 - -
Car05g01962 451 Gene3D - 102 413 - -
Car05g01962 451 PRINTS Nucleotide sugar epimerase signature 127 143 - -
Car05g01962 451 PRINTS Nucleotide sugar epimerase signature 317 332 - -
Car05g01962 451 PRINTS Nucleotide sugar epimerase signature 352 367 - -
Car05g01962 451 PRINTS Nucleotide sugar epimerase signature 392 409 - -
Car05g01962 451 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 94 432 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01962 Car-Chr5 64907648 64909930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01962 1 451 Miscellaneous Gene Families AT3G23820 79.870 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01962 K08679 - zju:107422361 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01962 05 64907648 64909930 Car05g01962 05 64907648 64909930 ECH