Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01949 ATGCTCGAACTTGAAAAGCGGGAAGCAATAGGTGAAATACTAAAACTAGATCCCAGTTACAAGCCTCCACCTGGTTTTAAACCGTTGTTAAAAGAAGATAGTGTTCCTTTGCCTGTCCAAGAATATCCCGGGTACAAATTTATCGGTCTAATATATGGGCCTGAAGGTGATAATCAAAAGCGATTAGAGAAGGAAACTGGTACCAAGATAAAAGTTCATGGAACCAAAGCAGACACAGGAGAGAAAGGTGAAATTAAACCAGGTACTGATATCCAGTGCAGTTACAAAGAGATGCATGTTAACATATCAGCTGATAGTTTTGATAAAGTGGATGCAGCAGTTTCCATCATTGAACTACTAATTTCTTCTGTAACTGGAAATTCAGCTGCTGGTTCCACTCCTTCTGTATCTGTTTCTGGGGACGGCACTAATGTTCTAAATCAAAACCAAGACAGCCTCCCTTCTCATGCAGTTTCTCTATCTCTGGAAAACCAGACTGTGTTTGAACCAGCAGCCGATACACAAATGCCTGGACAACACTTTCAATACTCTGGTCCATGGTTTTCGGCAGTTCCAACTCATACCCCTTTATTTGCTTCTTCTGGCAGTGTAGTTCCTCCAAATCCCCCATTTCTTGCTAGAACTCCCCATTTTCCATCACAAACAATGAGCGCTTCAAATTTGATTTCAACTTTTGGTGGTCAACCTGCACCTGTTGGTGGGTTCCACCCAATTATTCCAAATCAACAAGTTTCTATGCAAGCACCACTACCAACACAAATTTTACAGCATTCACAATGGACTCAAACAACTCCTTTGGGTTACGTTGGGCCACCAAGAAATCTTTCTGTAATACCTGCACAGAATTTGTCAGCACCAACAAATGTTTCACTTTCATTTCCAGTTTCTTTAAGCCAGCCAACTCCAATCAGACAGCCTCAAACACCAGTATCTAACCAGCCATTGGCCCCTCACAGCAATATGGGGCCAATGGCACCACCAGCGGTTACCCCTATGGGAGCTGTTTCTCTAGGTCCACAACCAGATGTTGAATTTAAGCCAGCCCAGTCAAATATGTCGATGATGCCACGACCTGGTAGTATTCATCCACATCATGCAGGTATGGCTCCTGGACCACAATCATCTTTGGGACCAATACCAACACCTGTTCATTCAACTGGAAACCATTTATCAGGATTTGTTTCATTTCCTTCGCCAGGAATATCTCCTTCACTTCCATTAGCTCAGCAATCAGGGATACCTAATTCTGCCTCTGGAGTTGCTTCTCATTACACCAACGTAAAACCACCACTGACCTCCATGCCCTCAAATTCTGGAAATTTTACTTTTCAAGGACAGCGGCCCAATGCAGACTACTATCAAGTGGTTTCCAGACCAAACAGTCAAGCTATTACTCATGTTGGTACACAAGAGCCACTGTCCGGTCCATGGCCACCACCATTTGGGCTTTCTGTGCCTGATCAGCCTCTTCAAAGCTTTCTAAGGACGCAAGTCTCCAACTGGGTGGATCAAAGTCAAGGTTATGTCTCTGCTGCTCCTTTTGGAGGAAGATCAGGTTCTGTCTCAATTGCATCCAGACACCCTGCATTTCCCTATGCTGGTCAACCTGCACCAAGATCTCAAGTCCCACAAATGGGTATGAGGAGCTTCATTACTGCCCCTCAAATGCCAAACTTGCCAAGTCCTGGATTCCAACGAGGTATGCACAATCGCCAAAGCTATTCTGCTCAGGGAACATGGCCAGATATTCCAATGTCTCAGAAGTTTGGCAACAATCCGTCCTTGGCTTCCGGTAAACCAGCATATCCTGCAGACCAAATTTATGATCCCTTTTCACCCACATCTGTTGCACCTCCACACCAGAAAGGTAATCCTGGAAAATGA 1905 0.4446 MLELEKREAIGEILKLDPSYKPPPGFKPLLKEDSVPLPVQEYPGYKFIGLIYGPEGDNQKRLEKETGTKIKVHGTKADTGEKGEIKPGTDIQCSYKEMHVNISADSFDKVDAAVSIIELLISSVTGNSAAGSTPSVSVSGDGTNVLNQNQDSLPSHAVSLSLENQTVFEPAADTQMPGQHFQYSGPWFSAVPTHTPLFASSGSVVPPNPPFLARTPHFPSQTMSASNLISTFGGQPAPVGGFHPIIPNQQVSMQAPLPTQILQHSQWTQTTPLGYVGPPRNLSVIPAQNLSAPTNVSLSFPVSLSQPTPIRQPQTPVSNQPLAPHSNMGPMAPPAVTPMGAVSLGPQPDVEFKPAQSNMSMMPRPGSIHPHHAGMAPGPQSSLGPIPTPVHSTGNHLSGFVSFPSPGISPSLPLAQQSGIPNSASGVASHYTNVKPPLTSMPSNSGNFTFQGQRPNADYYQVVSRPNSQAITHVGTQEPLSGPWPPPFGLSVPDQPLQSFLRTQVSNWVDQSQGYVSAAPFGGRSGSVSIASRHPAFPYAGQPAPRSQVPQMGMRSFITAPQMPNLPSPGFQRGMHNRQSYSAQGTWPDIPMSQKFGNNPSLASGKPAYPADQIYDPFSPTSVAPPHQKGNPGK 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01949 634 PANTHER RNA-BINDING KH DOMAIN-CONTAINING PROTEIN 1 629 - -
Car05g01949 634 MobiDBLite consensus disorder prediction 306 325 - -
Car05g01949 634 Gene3D K Homology domain, type 1 26 152 IPR036612 GO:0003723
Car05g01949 634 PANTHER RNA-BINDING PROTEIN RELATED 1 629 IPR045071 -
Car05g01949 634 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 33 127 IPR036612 GO:0003723
Car05g01949 634 SMART kh_6 29 122 IPR004087 GO:0003676
Car05g01949 634 MobiDBLite consensus disorder prediction 306 328 - -
Car05g01949 634 Pfam KH domain 46 117 IPR004088 GO:0003723
Car05g01949 634 ProSiteProfiles Type-1 KH domain profile. 46 117 - -
Car05g01949 634 MobiDBLite consensus disorder prediction 574 601 - -
Car05g01949 634 MobiDBLite consensus disorder prediction 574 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01949 Car-Chr5 64782078 64787024 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01949 K13095 - gmx:102668428 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01949 05 64782078 64787024 Car05g01949 05 64782078 64787024 ECH