Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01948 ATGGTTTCCAACAAAAGGGTAACTGATATTGTAACATTATTAGTAGTTGTACTATTGGTTGGTTTTGTGAACTCAGATTTAACAAAAGACAGAGAAGAATGTGCTGACAAATTAGTGACTCTTGCTAGTTGTCTTCCTTACGTGGGTGGTGATGCCAATACTCCTGCTATAGATTGTTGCACTGCCCTTAAACTAGTCCTTGATAAGACCAAGAAATGTATATGTATCCTAATCAAAGATCGTAATGATCCTAAACTTGGCTTCACTTTGAATGCCACTCTTGCTGTTCAGCTTCCAAATGCTTGTCACATTCCATCTAATATATCTCAATGTGTAGATCTTTTGCATTTGTCACCTAAATCTGCTGAAGCTAAGGTGTTTGAAGGACTTGGAAATTCTACCCAAACAAACAGTTCCACACCAGTTTCCAATGGTGGTGCTGAGAAGGGACCAAGCTCAAGTTCTGAGGAAAAGAGTGGTTGTGATTTGGGAAAGAGGTGGCTGGTGGCAGAGTTGGTTTTTGCTATTTTACCATTTGTTTTCATTCTAGCTTGA 555 0.391 MVSNKRVTDIVTLLVVVLLVGFVNSDLTKDREECADKLVTLASCLPYVGGDANTPAIDCCTALKLVLDKTKKCICILIKDRNDPKLGFTLNATLAVQLPNACHIPSNISQCVDLLHLSPKSAEAKVFEGLGNSTQTNSSTPVSNGGAEKGPSSSSEEKSGCDLGKRWLVAELVFAILPFVFILA 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01948 184 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 112 IPR036312 -
Car05g01948 184 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 9 179 IPR043325 -
Car05g01948 184 MobiDBLite consensus disorder prediction 131 158 - -
Car05g01948 184 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 9 179 - -
Car05g01948 184 MobiDBLite consensus disorder prediction 131 159 - -
Car05g01948 184 CDD AAI_LTSS 41 104 - -
Car05g01948 184 Pfam Probable lipid transfer 25 111 IPR016140 -
Car05g01948 184 Gene3D - 31 111 IPR036312 -
Car05g01948 184 SMART aai_6 34 111 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01948 Car-Chr5 64777131 64779705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01948 8 182 Acyl Lipid Metabolism Gene Families AT1G55260 42.778 5.24e-50 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01948 - - pvu:PHAVU_001G268300g 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01948 05 64777131 64779705 Car05g01948 05 64777131 64779705 ECH