Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01936 ATGTGGACCAACGTTTTCAAAATTGGTGGTCTTCATCAAATAACATGGTTTCAGTTTCTCCCTCATGAACCTGATCTGAACCCTCTACCTGATAAAAGTTTAAAATCGGACCAGAAGGATGCTGCAATGTTACTGGTGCTTTCATCACATCTGCAACTGCAAAAGGAAGGGTTTCTCAGCACATGGACCAATTCTTTCGTTGGACCCTGGGATCCATCCCAGGGTTTGCATAATCCAGATGAAAAGATTAAGCTGTGGCTTTTTCTTCCTGGGCGTCATTCATCAGTTTCGGAGACTGCTCAGCCAGCATTATCTGGCTTAAGAGTTGTCGCATCTGGGCTTTGGGTTGCTCCTGGGGATTCAGAAGAGGTTGCATCTGCTCTCTCTCAGGCTTTAAGGAATTGCATAGAAAGAGCACTGCTTGGGCTTTATTACATGAGATTTGGAGATGTATTTTCAAAGGTTCATCAATTTCAAAGTGAAGAACTGCTCAGGAAAGGACACCCTGCATTTGAGTTTGTCTTTGCTGCAACAGAGGAGGCAATCTTTATACATGTCATAGTGTCCTCAAAGAATATCCGGATGCTTTCCACCAGTGATCTGGAAAAACTATTGAAACATTCTACGGAGGCGACATATAGACTTCCAGTGGTTGTTTCTCCGCATGGGGTGCGTGGCAGCCTGACTGGTTGTTCTTCGAGTGATCTTGTCAAGCAAAGTTATTTCAGCAGTTCTGCCAAATTTAGGGTGTCAAATGGAATTATAGGTCTCCCATATCATGTTTCCCAGGGTGTTGGTTGCCAGCTGAGGGGGCAGAACTGTTTTGTTGAAGTAAGCCTTGGCTTCGCTAGATCTGGAACCGACAAGGCATTGCAGACAAACAGAAATATTGTTAGGAATTTACCTAAATCTCCTGTCATGGGACAAAGTGATCACAAGGGATCACCAGATCATTTGCTAGTTAATGAGAAAACATTTCTCTATCCAGCTGAGGCAGTGCTTGTACCAGTTTTTCAAACATCATTAGCCAGGTCTTCTTTGAGAAGATTTTGGCTGCAGAATTGGATGGGTCCATCGCTGACTGGTTCTTCATCCTTTATTCACTGTGCTGGTAATGTGGAATCTACTGAAGATCCTTGGACAGAAATCAATGGATCCCGCACGCAAAATAGTTATGATagtagtagcaacagtaacagtagcagtattagtaGCTTAAGTGCCAGCTCTAGCGATAGTGATTACAAAACTACAGGACTAAGTGAACTAGAGGCAGATGCTGATTCTTTAACGTGTAGACAGTCTATGGTATCTTCTGGTCGATTGGGAAGTGATGGATCCATATTGGGCTCTAAGCGGTCTCGAACAGGAGTGACACAGTCATTAAGTATGACTACACATATTCCTGGGCAAGATGCGTACATGTCTGATTTTGGTTCCATGGAAGTTAACAATTCAGCCATTACAAGAGTAGGGAACGAGCCAATTGGCTCTATCTGGGACTGGGATGATGAGGAAGATAAAGGCATGGAAATGGATATTCAAGCACTATTATCTGAATTTGGGGATTTTGGTGACTTCTTTGAAAATGATGTTTTGCCTTTTGGAGAGCCCCCAGGAACTGCTGAATCTCAGGCACTTATCTTGTCTGCCCCAGATTGTGGAGATGTCAACAGCAGTCCAGCTGGTGCCAGTGCGATGGATGTTTCTGATCAAATGCTTTTGCCTATTGGGTTTTCTTCCTTTGAGAGCTTTGATCCAACTCCTCCATCAGTCATGGAGGAATGTCTTAACAAAGGTCAAGATAACTTGAGTAACTCCATGCAAATGGGTCCAACCAATCAAACTCAAATGATGTATACAAGGGAGTATGATCATGTAATGAAAGCTGAAGCAATGATGACATTTGCTCAAGAATTTGGAGCTGTCGAGGCCCCTACTAGTGGGTTGTCCACAGCATTGTTCAGAAGCCCATATTTTCCGAAGTCTCGAAAAGCGGAGAGTTCAAATTCATGTTCTAACAATTACTTGTATGGTGCAGAGCCACCCTCTTCTCCCTATATTGAAGGATCAGAGGGAAAGAATGGACTGGTCATCAATACAAAAACATGTTCCGGAAAACACGATACTAGTATGACTCTCCACTCCAAAAATTATTATACGTTTGTTGATAGTAGAAAAGACATAAATGACAAAAAACCAGTCACATGTATTGATAACAGCATTGCAAAATCTGAGGGGATAGTACAACCTCCGTTCTCGAACATTGGTTCTAATGCTTCTGTCAAGTCTGTTCTCAGGAAGATGACTGGAGGCACAAAGGAAGCAGATCATTTCGTTCTATCTGCAAAAAATTTATTGGCAACTGATGTCACCTGTGCAATGTTGCAAGCTTCCATGTGCAGGTTACGACACACACTCTTATCTTCTGGTAACAACCTCCTTTCTGTTGGTTTGAGTAGGTCAACTGGGGTTACATTTTCTAATCAGCTTCCTACTGACCCAAGTACCACCACAGACATATCTGGCAAGTATGAGGTGAAAAAGAAAGAAAATATACCGGTTAGGATTGCAGGTGATATTGACGGAGGAATGCTTGATGGGCACCTTAATGCACCTGTTGGTGTTTGGCGCTCTGTAGGAGCTTCAAAAGTCGTAAAACCTTCCAATTCACCTAACATAGACGTTGGCTCTTCCTTTTCCCATAATTCATTCAATGAAGAAAGCCTCCTTTCTTATGGTCAAAGAAAACCACTTCAGGAGCTTCTTGATGGGATTGCATTGCTTGTCCAACAAGCTACTTCCTTTGTTGATCTTGCCTTGGATGCAGATTGTGGTGATGGTCCTTATGGTCTGCTTGCAATGCAAGAGCAGTGGAGGCGTGGGTTTTGTTGTGGGCCTTCAATGGTCCATGCTGGTTGTGGGGGAACTCTTGCCTCTTCTCATTCGCTTGACATTGCTGGGTTGGAGTTGGTGGATCCACTTTCTTCTGATGTTCATGCTTCTACTGTGATAAGTTTGCTGCAATCTGATATCAAAACAGCTTTAAAATCAGCATTTTCCAATCTGGAAGGGCCATTATCAGTGACTGATTGGTGCAAAGGACGCAACCAATTGGTTGATACTGGAAGTATAGTTGATGGAGTTTCTGCTGAATCCAGCATTAGTGAATGTAGGGATTCTTCAGAACCCATGAGTCCATCCCAATCATCTGTTTGTGGATCATCCAGTATTAAAGTTTCCAGCATCATGGATAATGCTAAGGTGGATGAGACTTCCCAAAGGAGATCCGGTCAAGATTCAGAATCAGAGCAGCACCCGTCTTCCCGGCTTAAACCTACCCTCATTGCTGTTCCATTACCTTCTATACTTGTAGGGTATCAGGATGATTGGCTCAAGGCATCGGCAAACTGTCTGCAGCACTGGGAAAAGGCTCCCCTAGAACCTTATGCTCTGCAGAAACCTATTACATATCATGTTGTATGTCCTGACATTGATCCCCTTACTTCTGCTGCTGCTGATTTTTTTCAACAACTAGGAACAGTCTATGAGACGTGCAAGCTAGGTACTCATTTACCTCTGGGCTTGGGGAATCAGATGGAGATAGAGCCTGCGAAGTCGTCAACTTGTGGTTTTGTTTTACTTGATTGCCCTCAATCAATGAAGATTGAGAGTAGCAATGCATCGCTTGTTGGTTCAGTAAGTGATTATTTTTTGTCTCTATCTAATGGCTGGGATCTGACTAGTTATCTCAAGTCTCTTTCGAAGGCGCTGAGAGCTTTGAACCTGAGCTCTTGTTTTTCAGCGAACCCCACAGAAGGAAGTAACAGTTCAAGTTTGGTAATCTATGTGGTGTGCCCGTTTCCCGATCCTACTGCAATTTTGCAAACTGTTATTGAATCTTCTGTTGCCATTGGTTCGGTTATCCAACAGTCTGATAGAGAGAGGAGATCTAGTTTGCATAGTCAGGTTGTGAAGGCATTGAGTGGTTGGGCAACTGTTGATGAGGCTTCGGCATCTAATATCCTTGTGCTTTCTGGGTGTAGTATTCCTAAATTGGTCTTGCAGATAGTTACAGTCGATGCCATTTTCAGAGTCACAAGTCCATCAGTGAGTGAGCTTGTCATTTTAAAAGAGACTGCCTTTACTGTGTATAACAAGGCTCGTCGCATTTCACGTGGCATCTCTAGTGATTTAGCTCAATTGGCATTTTCCAGCAGATCTCAGTCTGCTTTGGCACAAATGCCTTCTCCCATCTCTGGGATGTGGAAAGACTGTGTTGGTCCTCGAATGGTAGGACATTCTCTTCCAAGAGAGAGTGACATTGATGCTAGCTTGAGACCTGGTAATTGGGATAATTCTTGGCAACCAGCCAGGTCTGGGGTTCTAAACTGCGATCCAAGTAGAACTGGGGATATTTTTCTCCATGATGAAATTCGCTACATGTTTGAACCGCTTTTCATTCTTGCTGAACCAGGTTCTCCTGAACATGGTATTTCAGTTATTAGTAGCCCTAGTTCAGAAGCTTCCAAGGCATTGGCAGATGACAGTAGTGGTAACCATGGGCAGAGCACAAATACAGCTGGGAATGTGGATTCTGCTTCAAGCATTGATGGATCTGGGTCTGATCAAAAGACTCATCCAAGCTTACATTGTTGCTATGGATGGACAGAGGACTGGCGTTGGCTTGTATGCATCTGGACAGATTCAAGGGGAGAATTGCTGGATTGCAATATTTTCCCATTTGGTGGAATAAGCAGTAGGCAGGATACAAAAGGTCTACAGTGCCTTTTTGTCCAAGTTCTTCAGCAAGGTTGTCTGATACTCCAATCTTGTGATCCTGGCCTTGCAAAGCCTCGAGATTTTATGATAGCACGCATTGGAGGTTTCTATGAGCTTGAGTACCTTGAGTGGCAGAAAGCTATTTATTCAGTTGGCGGATCTGAGATGAAGAGATGGCCCCTGCAACTCCGTAAATCTCTGTCTGATGGGGCGTCCTCGACTAGTAATGGCTCTTCTTTGCAACAAACAGATATGAGTTTGATTCCAGAAAGAACCCTTCCTTCCTCCCCTAGTCCTTTGTACAGCCCTCATGCGAAACAAACTGGTTTTATAAAAGGCAGTTTAGACGGGCAACCTGCTGCAAGAAAGCAGTTAATGAGCGGACATTCTATGGTTGACAGTTCAAGGGGTTTGCTCCATTGGGCACAAAGCATTAGTTTTGTTGCAGTTTCTATGGACCATACTTTACAGTTAGTTCTCCCAGCGGATTCTTCATCTCCTGGTTATGTAGAAGGTTTCACTCCAGTGAAGTCTCTTGGTTCTGCATCTTCTGCATATATTCTTATTCCTTCTCCCAGCATGCGGTCCCTTCCTCCAACAGCTCTTCAACTCCCCACATGCCTGACCGCCGAGTCTCCACCTCTAGCTCATCTGCTTCACAGCAAGGGTTCTGCTCTTCCACTCTCCACAGGGTTTGTGGTTTCGAAAGCAGTACCTTCCATGAGGAAAGACTATAGAAGCAACCTGAAAGAAGAATGGCCTTCGGTACTTTCAGTGAGCCTCATTGATTATTATGGAGGTTCTAACATCCCCCAAGAGAAGATTGTTCGAGGAGTTAACAAGCAAGGTGGTAGAGGTTTGAGCTGGGATGCTAAAGATTTTGAAACTGAGACACACTTGATTTTGGAATCCCTTGCAGCAGAGCTTCATGCCTTATCATGGATGACAGTCAGCCCCGCATACCTAGAACGACGAACAGCACTTCCTTTCCATTGTGACATGGTTCTAAGACTTAGACGACTTCTTCACTTTGCTGACAAAGAGCTCTCCAAGCAGTCGGAGAAATCTTGA 5853 0.4367 MWTNVFKIGGLHQITWFQFLPHEPDLNPLPDKSLKSDQKDAAMLLVLSSHLQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVSETAQPALSGLRVVASGLWVAPGDSEEVASALSQALRNCIERALLGLYYMRFGDVFSKVHQFQSEELLRKGHPAFEFVFAATEEAIFIHVIVSSKNIRMLSTSDLEKLLKHSTEATYRLPVVVSPHGVRGSLTGCSSSDLVKQSYFSSSAKFRVSNGIIGLPYHVSQGVGCQLRGQNCFVEVSLGFARSGTDKALQTNRNIVRNLPKSPVMGQSDHKGSPDHLLVNEKTFLYPAEAVLVPVFQTSLARSSLRRFWLQNWMGPSLTGSSSFIHCAGNVESTEDPWTEINGSRTQNSYDSSSNSNSSSISSLSASSSDSDYKTTGLSELEADADSLTCRQSMVSSGRLGSDGSILGSKRSRTGVTQSLSMTTHIPGQDAYMSDFGSMEVNNSAITRVGNEPIGSIWDWDDEEDKGMEMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQALILSAPDCGDVNSSPAGASAMDVSDQMLLPIGFSSFESFDPTPPSVMEECLNKGQDNLSNSMQMGPTNQTQMMYTREYDHVMKAEAMMTFAQEFGAVEAPTSGLSTALFRSPYFPKSRKAESSNSCSNNYLYGAEPPSSPYIEGSEGKNGLVINTKTCSGKHDTSMTLHSKNYYTFVDSRKDINDKKPVTCIDNSIAKSEGIVQPPFSNIGSNASVKSVLRKMTGGTKEADHFVLSAKNLLATDVTCAMLQASMCRLRHTLLSSGNNLLSVGLSRSTGVTFSNQLPTDPSTTTDISGKYEVKKKENIPVRIAGDIDGGMLDGHLNAPVGVWRSVGASKVVKPSNSPNIDVGSSFSHNSFNEESLLSYGQRKPLQELLDGIALLVQQATSFVDLALDADCGDGPYGLLAMQEQWRRGFCCGPSMVHAGCGGTLASSHSLDIAGLELVDPLSSDVHASTVISLLQSDIKTALKSAFSNLEGPLSVTDWCKGRNQLVDTGSIVDGVSAESSISECRDSSEPMSPSQSSVCGSSSIKVSSIMDNAKVDETSQRRSGQDSESEQHPSSRLKPTLIAVPLPSILVGYQDDWLKASANCLQHWEKAPLEPYALQKPITYHVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHLPLGLGNQMEIEPAKSSTCGFVLLDCPQSMKIESSNASLVGSVSDYFLSLSNGWDLTSYLKSLSKALRALNLSSCFSANPTEGSNSSSLVIYVVCPFPDPTAILQTVIESSVAIGSVIQQSDRERRSSLHSQVVKALSGWATVDEASASNILVLSGCSIPKLVLQIVTVDAIFRVTSPSVSELVILKETAFTVYNKARRISRGISSDLAQLAFSSRSQSALAQMPSPISGMWKDCVGPRMVGHSLPRESDIDASLRPGNWDNSWQPARSGVLNCDPSRTGDIFLHDEIRYMFEPLFILAEPGSPEHGISVISSPSSEASKALADDSSGNHGQSTNTAGNVDSASSIDGSGSDQKTHPSLHCCYGWTEDWRWLVCIWTDSRGELLDCNIFPFGGISSRQDTKGLQCLFVQVLQQGCLILQSCDPGLAKPRDFMIARIGGFYELEYLEWQKAIYSVGGSEMKRWPLQLRKSLSDGASSTSNGSSLQQTDMSLIPERTLPSSPSPLYSPHAKQTGFIKGSLDGQPAARKQLMSGHSMVDSSRGLLHWAQSISFVAVSMDHTLQLVLPADSSSPGYVEGFTPVKSLGSASSAYILIPSPSMRSLPPTALQLPTCLTAESPPLAHLLHSKGSALPLSTGFVVSKAVPSMRKDYRSNLKEEWPSVLSVSLIDYYGGSNIPQEKIVRGVNKQGGRGLSWDAKDFETETHLILESLAAELHALSWMTVSPAYLERRTALPFHCDMVLRLRRLLHFADKELSKQSEKS 1950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01936 1950 Pfam MID domain of medPIWI 1273 1390 IPR041285 -
Car05g01936 1950 Pfam MID domain of medPIWI 1154 1270 IPR041285 -
Car05g01936 1950 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13 1 1943 - -
Car05g01936 1950 Pfam Mediator complex subunit 13 C-terminal domain 1544 1929 IPR009401 GO:0003712|GO:0006357|GO:0016592
Car05g01936 1950 MobiDBLite consensus disorder prediction 1510 1547 - -
Car05g01936 1950 MobiDBLite consensus disorder prediction 377 412 - -
Car05g01936 1950 MobiDBLite consensus disorder prediction 1056 1112 - -
Car05g01936 1950 PANTHER RAG1-ACTIVATING PROTEIN 1 1 1943 - -
Car05g01936 1950 MobiDBLite consensus disorder prediction 1056 1088 - -
Car05g01936 1950 MobiDBLite consensus disorder prediction 437 459 - -
Car05g01936 1950 MobiDBLite consensus disorder prediction 1089 1107 - -
Car05g01936 1950 Pfam Mediator complex subunit 13 N-terminal 2 336 IPR021643 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01936 K15164 - gmx:100782017 3251.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01936 05 64642706 64663518 Car05g01936 05 64642706 64663518 ECH