Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01745 ATGAGTATTCACTTCATCTTCTTGTTTTTGTCACTCTTTTTTTTCCATGTTTGTGTAGCAACCAATATTAGCAACAAACAAGAATATTCCAAACAAAAGACAAACCCATTCAGCCCAAAAGCCTCGCTCATTCGCTATTGGAACACAAAAATCTCCAACAAACTTCCAATCCCTAATTTCTTTCTCTCTAAAGTTTCCCCTCTCACACCATACCAATATGCTAACCTCGTAAACCTCCTCAAACAAAAACCCTTCTCTTCAAAATTCCATTATTCCCTCTGCTCCACACCATACTTATTATGCTCCTTCGACCACCCAAACAAACTTCAACAAACAAAAACTACCAAACGAGACGACGCAAACTTCGCCGTTTACTCAAACAAACGCTTCGCGAATTATGGCTCATCTCAACTTGGTGGAGTTGACTCGTTCAAAAACTATTCAAACGGGTTAAACACAAACAACGACTCGTTCAAACGATACAGCACAACCTCAACTCGCCACGGTGGGAATTTCAACAGTTATGCAGAAAACGGCAATGTAGCTAACACGAACTTCACCAGCTACGGTTCCGGTTCAACTTCCGGCACCGGCGAGTTCAAAAACTATGATAAACTCGTCAACGTCCCTAACCTCGGTTTCACCACCTACGACTCCGCCGCAAAGAATCATGAACTCTCTTTCTCAAGCTACGGTAACGAAACAAATTCTGGCTCTCAATCGTTCAATAGCTACGGGAAACGCGTTCGAAGCGGTAACAGCGATTTCACCAATTACGCCGTTGATGCCAACATTCTTCAATCAACGTTCACTAGTTACAGTGAATTGGGAACCGGCGCCGCCAATGATTCTTTCAGATCGTACAGCTTCAACGGTAACAATCCTCGGAACAATTTCAAAACATATAGCGCTGGCTCCGATTTCGGTTCCGATACATTTATCAGTTACCGGGATCGCGCTAACGTCGGCGATGACTCGTTTCAAAGCTACGGTTCAAAATCTAAATCCGGCACTGCTTCGTTTGCAAACTACGGCCAATCGTTCAACGAAGGAAACGATACTTTCACTGAATATGGAAAGGGATCGTCCGGTAAAACCGCGTTTGGATTCAAAACTTACGGGTTGGGACGCGCGTTCAAAGGCTACAACAAAAACGGCGTGTCGTTTTCAGCTTATAATAATTTCAGCGCGTTCAGTGGCAAAATAGTGAATAGATTTGTTGAGCCGGGTAAATTTTTCAGGGAGTCAATGCTGAAGGAAGGGAATGTAATGATGATGCCAGATATTAAAGACAAAATGCCTGCGAGGATGTTTTTACCCCTGACTATTTCGTCGAAATTACCGTTTTCATCCTCGAGGTTGGGTGAAGTAAAAGAAGCGTTTCACGCGCGGGAGGGTTCGGCGACCGAACGCGTGATAATTAACGCGCTGGGAGAGTGCGAGAGGGCTCCGAGTATGGACGAGACAAAACGGTGCGTTGGATCTGCTGAGGGTATGATTGAGTTTGCGGTTTCTGTATTGGGTCCCAATGTGGTTGTGAGAACAACTGAAAGTGTGAAGGGGTCAAAAACGAGTGTGATGATTGGAAAAGTCTATGGAATAGACGGTGGAAAAGTAACTAAATCAGTTTCATGTCATCAAAGTTTGTACCCTTACTTACTGTATTATTGTCACTCTGTCCCCAAAGTAAGAGTTTATGAAGCTGATATTCTTGACGTGGACACAAAGAAAAAAATTAATCAAGGAGTTGCCATCTGTCATATTGACACGTCAGCATGGGGTCCAGAGCATGGTGCTTTCTCAGCTTTGGGGTCAGGACCTGGAAAAATTGAGGTGTGTCACTGGATTTTTGAGAATGACATGACGTGGACTACTGCCATCTGA 1884 0.439 MSIHFIFLFLSLFFFHVCVATNISNKQEYSKQKTNPFSPKASLIRYWNTKISNKLPIPNFFLSKVSPLTPYQYANLVNLLKQKPFSSKFHYSLCSTPYLLCSFDHPNKLQQTKTTKRDDANFAVYSNKRFANYGSSQLGGVDSFKNYSNGLNTNNDSFKRYSTTSTRHGGNFNSYAENGNVANTNFTSYGSGSTSGTGEFKNYDKLVNVPNLGFTTYDSAAKNHELSFSSYGNETNSGSQSFNSYGKRVRSGNSDFTNYAVDANILQSTFTSYSELGTGAANDSFRSYSFNGNNPRNNFKTYSAGSDFGSDTFISYRDRANVGDDSFQSYGSKSKSGTASFANYGQSFNEGNDTFTEYGKGSSGKTAFGFKTYGLGRAFKGYNKNGVSFSAYNNFSAFSGKIVNRFVEPGKFFRESMLKEGNVMMMPDIKDKMPARMFLPLTISSKLPFSSSRLGEVKEAFHAREGSATERVIINALGECERAPSMDETKRCVGSAEGMIEFAVSVLGPNVVVRTTESVKGSKTSVMIGKVYGIDGGKVTKSVSCHQSLYPYLLYYCHSVPKVRVYEADILDVDTKKKINQGVAICHIDTSAWGPEHGAFSALGSGPGKIEVCHWIFENDMTWTTAI 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01745 627 SMART BURP_2 410 626 IPR004873 -
Car05g01745 627 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 2 626 - -
Car05g01745 627 Pfam BURP domain 412 624 IPR004873 -
Car05g01745 627 ProSiteProfiles BURP domain profile. 412 626 IPR004873 -
Car05g01745 627 PANTHER POLYGALACTURONASE-1 NON-CATALYTIC SUBUNIT BETA 2 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01745 Car-Chr5 62566662 62569573 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01745 - - lja:Lj1g3v0411530.1 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01745 05 62566662 62569573 Car05g01745 05 62566662 62569573 ECH