Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01731 ATGCTGAGAATCGCAGCGTGCGCGAAGAAACTCGCTACAACGGCGTCGTTTGAAACGCCAGGTCCTGCCGTTAGGGTTCTTCCACGATTCTACCACGAAAGGGTGGTTGACCACTACGATAATCCCCGAAATGTTGGATCCTTCGATAAAAACGATCCGACAGTAGGTACTGGTCTTGTCGGTGCACCGGCGTGTGGCGATGTTATGAAGCTTCAGATTAGGGTTGATGAGAACACCGGAAAAATCGTCGATGCTCGATTTAAAACATTCGGTTGTGGGTCGGCCATTGCTTCCTCCTCCGTCGCTACTGAATGGGTTAAGGGAAAGCAAATGGAGGAGGTTTTAACCATTAAGAACACTGAGATTGCAAAGCATCTTTCACTCCCACCTGTTAAGCTTCACTGCAGCATGCTTGCTGAGGATGCTATAAAAGCAGCTGTTAAAGATTATGAAGCTAAGCGAGCCTCGGCTAGGGCAGGCACATCAACAACCACTGGCGACAAATCTGCCACTGCATGA 519 0.4913 MLRIAACAKKLATTASFETPGPAVRVLPRFYHERVVDHYDNPRNVGSFDKNDPTVGTGLVGAPACGDVMKLQIRVDENTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLTIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRASARAGTSTTTGDKSATA 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01731 172 CDD IscU_like 31 146 IPR002871 GO:0005506|GO:0016226|GO:0051536
Car05g01731 172 Pfam NifU-like N terminal domain 31 155 IPR002871 GO:0005506|GO:0016226|GO:0051536
Car05g01731 172 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 15 165 IPR002871 GO:0005506|GO:0016226|GO:0051536
Car05g01731 172 Gene3D - 30 171 - -
Car05g01731 172 SUPERFAMILY SufE/NifU 30 154 - -
Car05g01731 172 TIGRFAM iscU: FeS cluster assembly scaffold IscU 31 154 IPR011339 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01731 Car-Chr5 62306204 62308159 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01731 K22068 - gmx:100806169 294.278