Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01725 ATGTTCAACTATGGTAGTGGATGTGACGGTGACAATGAGAATGAGTTTTCTTCGTTGAGAGGTGAAAATGGGAAGAATGACTTCTATTCTTCGACGTGTTTGCGTTTATATGATGAGGAAAAACAAGTTTCAAATGAGAATCCATTGTTTATGAACTCTTCTGTCGCTTTTGGTTCACATGATTTCGACGACTTTTTGCTACATAATGGTCCGGTTTCTGTAGTGTCTGATCTGTTTCACAATCCGCGGGAAAATAATAATCGAGTGGAAGATGATGGGGTTAGTTCTGGTGAAAAAGATGAGAAGAATGTGGTTATTGTCAATGATGAAGTTGAAGAAACAAAATATATTGGTGATGTAGAAGCTATAGAAGAGGTGAGGGTTAGGGACAGGGACACTCCTGTTGCTTGTTGTGAAGTTCAAGGTGCTGACGAATTGATTGGTTGCTCTAAAACTTCTTCTATTGTTGAGGGAGATTTGGGTCTTCTGCCAGAAGAAGATCCTCAGAAGAGTTTGAATGTTACTGATGGTGGAAACGAGGGAAAGGGGAATCAATATAACAGTGATGAAGCTGGTTCTTCTGGTGATGCTCAACGGGTAAACCTGGAGTTGGATAACTCTAAATTCGAGTTTGATCATTTTTGTGATAGTAAAGTTGATGTAAGTTCTTCCAATGTATCTGCAAAATCACTGGAGACCCTAAAACAAATTGTGCTGCCGTCGAATGGTGGGATAAGGAAAACATTAGAGAGCTCTTCCACTTTGACAAATCTATTAGATAAAAGTCACGTGGTATCTAAGATAGAGGACTTTGAACTAAATGAATTCTATGACGAGGTTGTTCAGGAAATGGAAGAAATTTTACTGGAGTCTATGGATTCTCCTGCGGCTAGGCTTACCATGGGTAACAGAATGTTTGAACCACAACTGTCAATGCCTTTAAGAGATGGTGGGTTGACTGCTTCTACTTCTAGTACAGATGATGCTTACCTGCTAGTTCAGCGCCCTAGAAGAATAGATAGAATTGAAGTGGTAGGTGCAAGGCAGAAAAGAGGGGATGTTTCTTTCAGTGAAAGATTGGTTGGAGTGAAGGAATACACTGTTTATAAAATCAAAGTGTGGAGTGGCAAAGATCAGTGGGAGGTTGAAAAGCGATATCGTGATTTCTTAACTCTTTACCGTTGTATGAAAACCTTATTCAATGAGCAAGGATGGACTTTACCTTTGCCTTGGTCTTCTGTTGAAAAGGAAGCAAAAATTTTTAGAAGTGCATCTCTTGATATTATTGCAAAGAGAAGTGTTCTCATTCAAGAGTGTTTACAGTCTATTCTCAGTAGCAGGTTCTTTTCAAGTCCTCCAAGAGCACTGGTTTGGTTTTTGTCCCCTCAAGATTCAAATCCCAGTTCACCTGTGTCAAATTCTCCAGTGTCTCTGTCTTCTTTCACAAGAGGGGAAAACATTCGAAATTTTTCCACTTTGGGGAAGACCATATCACTTATTGTTGAAATTCCATCAAATAAATCAATGAGACAGTTGTTAGAAGCACAACATCACACCTGTGCTGGATGCCATAGACATTTTGATGATGGAAGTACTTCAATTTGGGATTTTGTACAGGCATTTGGATGGGGGAAACCTCGACTCTGTGAATATACTGGTCAACTGTTCTGCTCTTCATGTCATACAAATGAGACTGCAGTCTTGCCAGCACGGGTTTTACATAATTGGGATTTCACTCATTATCCTGTTTCTCAGATGGCTAAGTCATATCTGGATTCTATACATGAACAGCCCATGCTTTGTGTCACTGCCGTTAATCCCTTCCTTTTGTCAAAGGTCCCAGCCTTGCTTCATGTTATGAGTGTCAGGAAAAAGATAGGAACAATGCTTCCATATGTTCGCTGCCCATTCCGGAGGTCTATCAATAGAGGAGTTGGAAATCGAAGATATCTTCTTGAAAGCAATGACTTTTTCGCTCTTAGAGATTTGATTGATCTTTCCAAGGGAGTCTTTTCTGCACTTCCTGTGATGGTGGAAACTGCGTCGAGGAAAATCCTGGAACACATTACTGATCAATGTCTTGTATGTTGTGATGTGGGAATCCCGTGTAGTGCCCGGCAAGATTGCAGTGACCCATCTTCTCTCATTTTCCCATTTCAGGAAGATAACATTGAAAGGTGTAAAGCTTGTCAGTCGGTTTTCCATAAACGCTGCTTTCGAAAGCTTGCGAATTGTCCTTGTGGGGAACAGTCCAGATTAAACAAGACAAGGAGTTTAACCAACAGAGCCAACCAAATGGGAGGTGGTGGAACGGGAGGAGCTTTGGACTTTTTAGGCAAGGGACTGAGTTCTGGGTTGTCGCCTAGGTTTCTCTCTGGATTATTTACGAGAGAAAAGCCTGAAAAGACAAGGGAGCATAAAGGCGAAAATATCATTTTAATGGGTTCCTTACCAAGCAATTCTTTATGA 2469 0.407 MFNYGSGCDGDNENEFSSLRGENGKNDFYSSTCLRLYDEEKQVSNENPLFMNSSVAFGSHDFDDFLLHNGPVSVVSDLFHNPRENNNRVEDDGVSSGEKDEKNVVIVNDEVEETKYIGDVEAIEEVRVRDRDTPVACCEVQGADELIGCSKTSSIVEGDLGLLPEEDPQKSLNVTDGGNEGKGNQYNSDEAGSSGDAQRVNLELDNSKFEFDHFCDSKVDVSSSNVSAKSLETLKQIVLPSNGGIRKTLESSSTLTNLLDKSHVVSKIEDFELNEFYDEVVQEMEEILLESMDSPAARLTMGNRMFEPQLSMPLRDGGLTASTSSTDDAYLLVQRPRRIDRIEVVGARQKRGDVSFSERLVGVKEYTVYKIKVWSGKDQWEVEKRYRDFLTLYRCMKTLFNEQGWTLPLPWSSVEKEAKIFRSASLDIIAKRSVLIQECLQSILSSRFFSSPPRALVWFLSPQDSNPSSPVSNSPVSLSSFTRGENIRNFSTLGKTISLIVEIPSNKSMRQLLEAQHHTCAGCHRHFDDGSTSIWDFVQAFGWGKPRLCEYTGQLFCSSCHTNETAVLPARVLHNWDFTHYPVSQMAKSYLDSIHEQPMLCVTAVNPFLLSKVPALLHVMSVRKKIGTMLPYVRCPFRRSINRGVGNRRYLLESNDFFALRDLIDLSKGVFSALPVMVETASRKILEHITDQCLVCCDVGIPCSARQDCSDPSSLIFPFQEDNIERCKACQSVFHKRCFRKLANCPCGEQSRLNKTRSLTNRANQMGGGGTGGALDFLGKGLSSGLSPRFLSGLFTREKPEKTREHKGENIILMGSLPSNSL 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01725 822 Pfam Putative zinc-RING and/or ribbon 547 750 IPR025258 -
Car05g01725 822 SMART DUF4206_2 547 753 IPR025258 -
Car05g01725 822 ProSiteProfiles PX domain profile. 347 466 IPR001683 GO:0035091
Car05g01725 822 PANTHER PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN 19 822 - -
Car05g01725 822 PANTHER DIFFERENTIALLY EXPRESSED IN FDCP 8 HOMOLOG 19 822 - -
Car05g01725 822 Pfam PX domain 374 461 IPR001683 GO:0035091
Car05g01725 822 SUPERFAMILY PX domain 359 465 IPR036871 GO:0035091
Car05g01725 822 MobiDBLite consensus disorder prediction 160 195 - -
Car05g01725 822 Gene3D - 350 469 IPR036871 GO:0035091
Car05g01725 822 CDD PX_domain 354 453 - -
Car05g01725 822 MobiDBLite consensus disorder prediction 172 195 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01725 - - gmx:100800081 1134.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01725 05 62226044 62231264 Car05g01725 05 62226044 62231264 ECH