Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01719 ATGGGCATAGTAGACATTATTGATTTATCTAGTGACGATGAAAGTGAAAGCGTTGGTGTTGGCCCTGTAGCTGTTAAATTGGAACCAGAATATGTTACAAGTGCTGAGAAACAGCATGTGACTGGCAAATTTGGACTAGTCAAGCACGAGAAATCGCCATATCATGTCACAAGACAAGATGCTGACGAAAATATAAGTTATAGTGCCCCAAGTACAGGTCATAGTAACTCCAGTGTATTGGAGCAGGGACCATCGCCAGTTGATGATACGGGCATCTCTTATGCGTCATCGATTTGTGCTGCACCGCTTTCCAGGCAGTTTTGGAAAGCCGGAAGCTATGATGATGCGGTTGGTTCTCGAATTACAGTCAAAGATGGAAAAAACTATCTGCATGTACACCCTATGTTCCTTCACTCAAATGCAACTTCGCACAAGTGGGCATTTGGTGCCATAGCAGAGCTTCTTGATAATGCTGTTGATGAGATCCAAAATGGGGCTACCTTTGTCATTGTAGATAAAACTTCAAATCCAAGAGATGGAAGTTCAGCACTGTTGATTCAAGATGATGGTGGTGGCATGGATCCGGAAGCAATACGCCGTTGCATGAGTTTTGGATTTTCCGATAAAAATTCAAAGCATGCTATTGGACAGTATGGAAATGGCTTCAAGACCAGTAGTATGAGGCTTGGTGCAGATGCTATAGTCTTCAGCCGCCATATGAATAATGGGATTTTGACTCAAAGCATTGGACTTCTGTCATATACATTTTTGATGAGAACACAGCTTGACAGAATAGTAGTGCCAATGGTGAATTATGAGTTTAATACCTCAACTGGATCATTGGATATGTTAAATGGCAAAGAGCATTTTATGGCGAATTTATCATTGCTGCTGCGTTGGTCACCATACTCATCAGAAGCAGATCTTCTGAAACAATTTGATAACATGGGATCTCACGGTACTAAAGTTATTGTATATAATTTGTGGTTCGGTGATGATGGGAATACAGAGTTAGATTTTGATACAGAACCTAAGGATATTCGTATTGCTTGGGATATCAAGAAAGTCGAGACTCGTCCTGCATGGAAAAGAATCAATGAGGATCACATTGCTAATCGATTTCGTTATTCTTTACGTGTATACTTGTCCATATTGTACTTGCAGCTACCAAAAAGTTTCCAAATTATATTGCGAGGACAAGCTGTGAAGCCACATAGCATTGCCGACGATCTTAAACTTGTTGAATTTGTTAAATATACACCACAAACTGGTGGAACCGTAGAGGAAATTTTTGTAACAATTGGATTTGTTAAGGAAGCCCCTCTTCTCAATATCCATGGTTTCAATGTATATCACAAACATCGGCTGATACTGCCATTTTGGCAGGTTGTAAGATATTCAGACAGTAGAGGTAGAGGAGTTGTTGGTATCATGCAAGCAGATTTTGTTGAGCCAACTCATGATAAACAAGATTTTGAGAAAACTTCCCTGTTTCAAAAGCTAGAAGCCAGATTGAAGTCAATGACATGGGAATACTGGGATACTCATTGTAAACTAATAGGGTATCGGCCGCAAGATAAGCCTCGGACTTTAGTTACCCAACCACATCCGTCATTGCGGCAACCACTTGGTATGTAA 1638 0.4048 MGIVDIIDLSSDDESESVGVGPVAVKLEPEYVTSAEKQHVTGKFGLVKHEKSPYHVTRQDADENISYSAPSTGHSNSSVLEQGPSPVDDTGISYASSICAAPLSRQFWKAGSYDDAVGSRITVKDGKNYLHVHPMFLHSNATSHKWAFGAIAELLDNAVDEIQNGATFVIVDKTSNPRDGSSALLIQDDGGGMDPEAIRRCMSFGFSDKNSKHAIGQYGNGFKTSSMRLGADAIVFSRHMNNGILTQSIGLLSYTFLMRTQLDRIVVPMVNYEFNTSTGSLDMLNGKEHFMANLSLLLRWSPYSSEADLLKQFDNMGSHGTKVIVYNLWFGDDGNTELDFDTEPKDIRIAWDIKKVETRPAWKRINEDHIANRFRYSLRVYLSILYLQLPKSFQIILRGQAVKPHSIADDLKLVEFVKYTPQTGGTVEEIFVTIGFVKEAPLLNIHGFNVYHKHRLILPFWQVVRYSDSRGRGVVGIMQADFVEPTHDKQDFEKTSLFQKLEARLKSMTWEYWDTHCKLIGYRPQDKPRTLVTQPHPSLRQPLGM 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01719 545 PANTHER HISTIDINE KINASE-, DNA GYRASE B-, AND HSP90-LIKE ATPASE FAMILY PROTEIN 1 535 - -
Car05g01719 545 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 149 242 - -
Car05g01719 545 Gene3D - 134 275 IPR036890 -
Car05g01719 545 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 1 535 IPR045261 GO:0016887
Car05g01719 545 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 147 352 IPR036890 -
Car05g01719 545 Pfam Morc6 ribosomal protein S5 domain 2-like 376 513 IPR041006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01719 Car-Chr5 62120610 62130883 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01719 - - gmx:100795667 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01719 05 62120610 62130883 Car05g01719 05 62120610 62130883 ECH