Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01713 ATGAAGGAATACTCAGTTTCCTGTAAAAGACATAGAAAAGAACAATATTTTGCAGCAGACCACACAAGAAGACAACACCAATGCACACAAAACAACTCTCTTACATTGTCCACTTCTCAACTAAACATTCCACATATGTTACATGTTTTTGTTTCTTTGCTGTTTCTTCTTACTTCAACTACCTCAGCATTGTCTCATAACCCAATTGTCTCAGATTCTGCTCACCCCTTGAAGACTAACCAAACATTTAAAGCAAGTGCAGAGTTGCTTAAGTTAAGAAGAATCAGAACTCACTTGAAGAAGATCAATAAACCTTCTGTGAAGACAATTCAGagtccagatggtgatttgatagattgtgttttatctcatcagcagccagcttttgatcatcctaagcttaaagggcatacaccattggatccaccaaaaaggccaaagggatactacaaaaatggagaaaatgttagtgagagctttcaactttggactaattctggtgaaacatgtccaaaaggaactattccaatcagaagaacaacagaagaagatattttaagagcaagttctatccaaagatttggaagaaaaccaaGACCTGTAAGAAGAGATTCAACTAGCAGTGATCATGAGcatgcaattatttttgtaaatggaaatcaatactttggagcaaaggcaaacataaatgtgtgggcaccccatgtaacagatgcatatgaatttagcttgtcacaaatttgggttattgctggatcttttggtaatgatctgaatacaatagaggctggttggcagGTAAGTCCAGAACTATATGGAGACAACTATCCAAGGTTCTTCACTTATTGGACAacagatgcatatcaaacaactggatgctacaatttactatgttcaggctttatccaaactaacaacaagatagcaataggagcatcaatctccccaacatctacttataacagaagacagtttgatattggtataatgatttggaaggatccaaagtatggacactggtggctagagtacggttctggactattagttggatactggccagcaaacatgtttagtcacttgaggagtcatgcaagcatgatacaatttggaggtgaaattgtgaatactcgttcaaagggttaccacactagcactcaaatggggagtggccattttgctgaacaagggtttagaaaagcagcatattttagaaacttacaagtcattgattgggataataatttgcttcctcttgctaatattcagcacttggcagaccattctaattgttataacataagacagggtaataataatgcttggggaaattatttttattatggtggtcctgggagaaatgtgaaatgcacatga 1377 0.1147 MKEYSVSCKRHRKEQYFAADHTRRQHQCTQNNSLTLSTSQLNIPHMLHVFVSLLFLLTSTTSALSHNPIVSDSAHPLKTNQTFKASAELLKLRRIRTHLKKINKPSVKTIQSPDGDLIDCVLSHQQPAFDHPKLKGHTPLDPPKRPKGYYKNGENVSESFQLWTNSGETCPKGTIPIRRTTEEDILRASSIQRFGRKPRPVRRDSTSSDHEHAIIFVNGNQYFGAKANINVWAPHVTDAYEFSLSQIWVIAGSFGNDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQTTGCYNLLCSGFIQTNNKIAIGASISPTSTYNRRQFDIGIMIWKDPKYGHWWLEYGSGLLVGYWPANMFSHLRSHASMIQFGGEIVNTRSKGYHTSTQMGSGHFAEQGFRKAAYFRNLQVIDWDNNLLPLANIQHLADHSNCYNIRQGNNNAWGNYFYYGGPGRNVKCT 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01713 458 Pfam Neprosin 241 451 IPR004314 -
Car05g01713 458 Gene3D - 233 344 - -
Car05g01713 458 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 30 457 - -
Car05g01713 458 PANTHER CARBOXYL-TERMINAL PEPTIDASE 30 457 - -
Car05g01713 458 Pfam Neprosin activation peptide 109 215 IPR025521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01713 Car-Chr5 62040696 62044803 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01713 - - gmx:100782442 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01713 05 62040696 62044803 Car05g01713 05 62040696 62044803 ECH
Car07g01074 07 9516153 9519850 Car05g01713 05 62040696 62044803 PCT