Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01710 ATGGCTTCCCCTGCTCGTTTTGACGATGATTTTGATTTCGGAGGCGAATTTGGCGGAAGGCGTTCAGGTAATAAGAGACCATCTCTGGATTATGACGATGAAGATTATGATAACGATCCTTTTGCACCGAAGAAGGCTAAATCTAAAGTGGAAGAAACTGCCTCGGGTGTAACAACGGGAATGATTTTGTCACTTCGCGAGAGCCTTCAGGAATGTAAGGATCAGCTTGCAACATGCCAAAATGAGCTTGAGGCTGCAAAGTCTGAGATTCAGAGTTGGCATTCTTCACTTCAAAATGAGCCTGTTGTACGTACTGGGGATACTCCAGAGCCAAAAATGTTGATTATTTATCTTCAGGCCCTGAAATCATCTGAAGAGTCTTTGAGAGACCAGCTTGAAAAAGCAAAGAAAAAAGAAGCTGCCTTCATTGTAACATTTGCAAAACGGGAACAAGAGATAGCAGAGTTGAAATCTGCTGTGCGGGATCTGAAAGTACAACTTAAGCCTCCATCAATGCAGGCAAGGAGGCTGTTACTGGATCCGGCTGTTCATGAAGAGTTCACACGTTTGAAGAATTTAGTGGAGGAAAAGGACAAAAAAGTAAAGGAGTTGCAAGATAACATTTCTGCTGTAACTTTTACTTCGCAAAGCAAGATGGGGAAGATGCTGATGGCTAAATGTAGAACCCTGCAGGAAGAAAATGAGGAGATTGGAAATCAAGCTTCTGAAGGAAAGATACATGAATTAACAATGAAACTTGCATTACAGAAGTCCCAGAATGCACAACTCAGAAGTCAATTTGAAGGATTGCAGAAGCATATGGAAGGGCTGACAAATGATGTGGAGAGATCAAATGAAACGGTTCTTATGTTGCAAGATAAGTTAGAAGAGAAAGATCAGGAGATCCAAAGACTGAAAAATGAGCTCCAACAAAAAAACCTAACGGAGGATGGAAGGAATGATGCAGCAGCTAATAGGAGTGACAGTGATAAAATAGTGACCGAGGAAGATGCAAATTAA 1020 0.4147 MASPARFDDDFDFGGEFGGRRSGNKRPSLDYDDEDYDNDPFAPKKAKSKVEETASGVTTGMILSLRESLQECKDQLATCQNELEAAKSEIQSWHSSLQNEPVVRTGDTPEPKMLIIYLQALKSSEESLRDQLEKAKKKEAAFIVTFAKREQEIAELKSAVRDLKVQLKPPSMQARRLLLDPAVHEEFTRLKNLVEEKDKKVKELQDNISAVTFTSQSKMGKMLMAKCRTLQEENEEIGNQASEGKIHELTMKLALQKSQNAQLRSQFEGLQKHMEGLTNDVERSNETVLMLQDKLEEKDQEIQRLKNELQQKNLTEDGRNDAAANRSDSDKIVTEEDAN 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01710 339 Coils Coil 146 166 - -
Car05g01710 339 Pfam WTAP/Mum2p family 134 288 IPR033757 GO:0000381|GO:0005634|GO:0080009
Car05g01710 339 Coils Coil 62 89 - -
Car05g01710 339 MobiDBLite consensus disorder prediction 1 53 - -
Car05g01710 339 PANTHER PROTEIN OF 37 KDA-LIKE PROTEIN, PUTATIVE-RELATED 1 337 - -
Car05g01710 339 Coils Coil 187 207 - -
Car05g01710 339 MobiDBLite consensus disorder prediction 308 339 - -
Car05g01710 339 MobiDBLite consensus disorder prediction 23 51 - -
Car05g01710 339 PANTHER WILMS' TUMOR 1-ASSOCIATING PROTEIN 1 337 IPR033757 GO:0000381|GO:0005634|GO:0080009
Car05g01710 339 Coils Coil 118 141 - -
Car05g01710 339 Coils Coil 246 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01710 Car-Chr5 62009877 62016818 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01710 K22824 - gmx:100805415 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01710 05 62009877 62016818 Car05g01710 05 62009877 62016818 ECH