Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01708 ATGGCACCACCAAGCATAACGAAAACTTCGACCCCCTTAAACTTAATGGGCCTCATCGATAATAAGAGTAACTTTCCCTTATCCATAAACTTACACGAATCAAGTTTTCTCGCAAATGGGCACCCTTTTCTCACCCAAGTCCCTCCAAACATAACAACCGTCCCTTACCATTTcaaatccaacaacgataccaaaaacaaaaacaCCACGTCACAAGGTTGCTTCGTTGGGTTCGACGCCACCGAACCCAAAAGCCGCCACGTGGTTCCACTTGGCAAACTAAAAGCCATCAAATTCATGAGCATATTCAGGTTCAAGGTTTGGTGGACAACTCACTGGATTGGAACAAACGGACACGAATTAGAACACGAAACCCAAATGTTAATACTAGACAAAAACAACTCCTTAGGACGACCCTATGTTTTACTCCTCCCAATCCTCGAAAACTCTTTCCGAACCTCACTCCAACCCGGTCTCAACGACTACGTGGACATGTGCGTCGAAAGCGGTTCTACACGTGTCACCGAATCCCACTTTAAAACATGTCTTTACATCCACGTCAGCAACGATCCATACCGTTTAGTAAAAGAAGCCGTGAAAGTAATCCGGGCCCACTTAGGAACTTTCAAGGTTCTCGAAAAGAAAACACCACCGAATATTATTGAGAAATTCGGTTGGTGCACGTGGGACGCGTTTTACTTGAAGGTACATCCAAAAGGTGTGTGGGAAGGTGTGAAGGGTCTTAAGGAGGGTGGGTGTCCTCCAGGTTTTGTTATAATCGACGATGGATGGCAATCTATTTGTCATGACGAGGATCCAATTACGGACCAAGAAGGAATAAACCGAACCTCAGCTGGGGAACAAATGCCATGTAGGCTAATTAAATTTGAGGAGAATTATAAATTTAGGGAATATGAAAGTCCTTATAATAATGGAGGAAAAGGTATGGGTGGTTTTATTAGGGATTTGAAAACAAAGTTTCGGAGTGTGGAGAATGTTTATGTTTGGCATGCGCTTTGTGGGTATTGGGGTGGGATTAGACCTAAAGTGGCGGGAATGCCCGAGGCTAAACTTGTTGCTCCCAAGCTGTCTCCGGGGCTGAATATGACAATGGAGGATTTAGCGGTGGATAAGATTCTTCACAATGGTGTGGGCCTAGTGCCACCAAATAAAGTCCAAGATATGTATGATGGGCTCCACTCTCATTTGGCATCGGTGGGAATTGACGGCGTTAAGGTTGACGTTATCCATTTGCTTGAGTTACTCTCAGAGGAATACGGTGGACGTGTTGAACTTGCTAGAGCTTATTACAAAGCACTTACAGCATCAGTGAAGAAACATTTCAAAGGTAATGGAGTTATTGCCAGCATGGAGCATTGTAACGATTTCTTTCTCCTCGGAACAGAAACCATATCACTCGGTCGAGTAGGCGATGATTTTTGGTGCTCTGATCCCTCAGGAGACCCAAACGGTACATATTGGCTTCAAGGTTGTCACATGGTACATTGTGCCTACAACAGTTTATGGATGGGAAATTTTATTCAACCTGATTGGGATATGTTTCAGTCAACTCACCCTTGTGCCGAATTTCATGCTGCTTCTAGAGCCATTTCTGGTGGACCTATTTATGTTAGTGATTCTGTTGGTAATCACAACTTCAAGTTGCTTCAAACTCTTGTTTTTCCTGATGGTTCTATCTTGCCTTGTCAACATTATGCACTTCCTACACGAGATTGCTTGTTTCAAGACCCTTTACATGATGGCAAAACAATGCTCAAAATTTGGAATCTCAACAAATACACAGGTGTTTTGGGTTTATTCAATTGCCAAGGTGGTGGGTGGTGTCCTGTGACACGGCGAAACAAGAGTGCGTCTGAATTTTCACACACAGTGACATGTTCTGCAAGTCCTAAAGACATTGAATGGTGCAATGGAAAAACTCCAATGTCCATGAAAGGTGTGGATGTGTTTGCTGTGTATTTGTTCAAGGAGAACAAACTGAAGCTCATGAAGTGTTCCGATAAACTGGAGGTTTCGCTCGAGCCGTTTAGTTTTGAGCTGATGACAGTGTCTCCAGTGAGAGTTTTTTCCAAGAGGTTAATTCAGTTTGCTCCAATTGGGCTAGTGAACATGCTTAATTCTGGTGGTGCTGTTCAGTCTGTGGAGTTTGAAGATGATGCAAGTTTGGCTAAAATTGGGGTGAAGGGTTGTGGGAAGATGAAAGTGTTTGCATCAGAGAAGCCACTTTGTTGCAAAATAGATGGGGTGGCTGTGGAATTTGATTATGAGGACAAAATGGTGAAAGTACAAATTCCTTGGCCTGGTTCTTCAAGATTGTCTTTGGTTGAGTTTTTATTTTGA 2361 0.4274 MAPPSITKTSTPLNLMGLIDNKSNFPLSINLHESSFLANGHPFLTQVPPNITTVPYHFKSNNDTKNKNTTSQGCFVGFDATEPKSRHVVPLGKLKAIKFMSIFRFKVWWTTHWIGTNGHELEHETQMLILDKNNSLGRPYVLLLPILENSFRTSLQPGLNDYVDMCVESGSTRVTESHFKTCLYIHVSNDPYRLVKEAVKVIRAHLGTFKVLEKKTPPNIIEKFGWCTWDAFYLKVHPKGVWEGVKGLKEGGCPPGFVIIDDGWQSICHDEDPITDQEGINRTSAGEQMPCRLIKFEENYKFREYESPYNNGGKGMGGFIRDLKTKFRSVENVYVWHALCGYWGGIRPKVAGMPEAKLVAPKLSPGLNMTMEDLAVDKILHNGVGLVPPNKVQDMYDGLHSHLASVGIDGVKVDVIHLLELLSEEYGGRVELARAYYKALTASVKKHFKGNGVIASMEHCNDFFLLGTETISLGRVGDDFWCSDPSGDPNGTYWLQGCHMVHCAYNSLWMGNFIQPDWDMFQSTHPCAEFHAASRAISGGPIYVSDSVGNHNFKLLQTLVFPDGSILPCQHYALPTRDCLFQDPLHDGKTMLKIWNLNKYTGVLGLFNCQGGGWCPVTRRNKSASEFSHTVTCSASPKDIEWCNGKTPMSMKGVDVFAVYLFKENKLKLMKCSDKLEVSLEPFSFELMTVSPVRVFSKRLIQFAPIGLVNMLNSGGAVQSVEFEDDASLAKIGVKGCGKMKVFASEKPLCCKIDGVAVEFDYEDKMVKVQIPWPGSSRLSLVEFLF 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01708 786 Gene3D Aldolase class I 216 560 IPR013785 -
Car05g01708 786 PANTHER - 22 786 IPR008811 -
Car05g01708 786 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED 22 786 - -
Car05g01708 786 SUPERFAMILY (Trans)glycosidases 223 559 IPR017853 -
Car05g01708 786 Pfam Raffinose synthase or seed imbibition protein Sip1 30 770 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01708 Car-Chr5 61992957 61996481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01708 1 786 Glycoside Hydrolase AT5G40390 61.335 0.0 1032
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01708 K06617 - gmx:100800308 1301.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01708 05 61992957 61996481 Car05g01708 05 61992957 61996481 ECH