Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01704 ATGGGTAGCGGTGAAATGGGAGTAGCGGCAGAAAGCGACGGTGCTTCGCTACCGTCAGTCGGCACCGACGCAATGAAAAGAAGAGTCACATACTTCTACGAACCTACCATCGGCGATTATTACTACGGTCAAGGTCACCCAATGAAACCCCATAGAATACGAATGGCACACAATCTCATCGTTCATTACTCACTCCACCGTCGTATGCAAATTAACCGTCCTTTCCCCGCCGGTCCTGACGACATCCGCCGTTTTCACTCCGACGACTACGTCGACTTCCTTTCCTCCGTTTCCCCCGAAATTCTCTCCGAGAGTTCTCATTCTCACTACCGTCAGCTCAAGCGTTTCAATGTTGGTGAGGATTGTCCCGTTTTTGACGGACTTTTTCCTTTCTGTCAGGCTTCTGCTGGTGGATCCATCGGCGCTGCTGTTAGACTTAACCGTAATGATGCTGATATTGCTATTAACTGGGCTGGTGGTTTGCATCATGCCAAGAAGGCGGAAGCTTCTGGATTTTGCTATGTTAATGATATTGTTCTCGGTATTCTTGAGCTTCTCAAAGTTCATAGGCGTGTGCTGTATGTTGATATTGATGTCCACCATGGAGATGGCGTTGAGGAGGCATTTTACACTACTGATAGAGTGATGACAGTCTCATTTCACAAGTTTGGTGATTTTTTCCCAGGAACTGGGCATATTAAAGATACTGGGTGTGGCCTTGGAAAGGACTATGCCCTAAATGTTCCTTTGAATGATGGAATGGATGATGAGAACTTCCGCGGTCTGTTCCGTCCAATCATGCAAAAAGTCATGGACATTTATCAACCTGATGCAGTTGTTCTTCAATGTGGAGCTGATTCATTGTCTGGTGACAGGCTGGGTTGCTTCAACTTGTCTGTGAAGGGACATGCAGATTGCCTTCGTTTCCTTAGATCTTTCAATGTTCCTCTCATGGTTTTGGGTGGGGGAGGATACACAGTACGGAACGTTGCTCGTTGTTGGTGTTACGAGACAGCAGTGGCAGTAGGAGTGGAGCCCAGTAATAAGTTGCCATACAACGAATATTATGAATATTTCGGCCCAGACTATACACTACATGTTGAACCAAACAACATGGAGAACCTAAACACACCCAAGGATATGGAAAAAATCAGGAACATTTTACTTGAACAACTTTCCAGTCTTCCTCATGCACCCAGTGCACCTTTTCAGACAACACCATCAACCACACAAGTTCCAGAAGAGGAAGAAGAGGACATGGATATAAGACCAAAACGTCGCATGTGGAGTGGTGAAGATTATGATTCTGATCCTGATGAAGATGACAAGGCCGGTGTAAAGAACTCAACTTTAACTGCTCATATGAGGTGA 1371 0.4573 MGSGEMGVAAESDGASLPSVGTDAMKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMQINRPFPAGPDDIRRFHSDDYVDFLSSVSPEILSESSHSHYRQLKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVRLNRNDADIAINWAGGLHHAKKAEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDTGCGLGKDYALNVPLNDGMDDENFRGLFRPIMQKVMDIYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTVRNVARCWCYETAVAVGVEPSNKLPYNEYYEYFGPDYTLHVEPNNMENLNTPKDMEKIRNILLEQLSSLPHAPSAPFQTTPSTTQVPEEEEEDMDIRPKRRMWSGEDYDSDPDEDDKAGVKNSTLTAHMR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01704 456 Pfam Histone deacetylase domain 46 339 IPR023801 -
Car05g01704 456 SUPERFAMILY Arginase/deacetylase 27 395 IPR023696 -
Car05g01704 456 PRINTS Histone deacetylase superfamily signature 276 286 IPR000286 -
Car05g01704 456 PRINTS Histone deacetylase superfamily signature 191 206 IPR000286 -
Car05g01704 456 PRINTS Histone deacetylase superfamily signature 159 182 IPR000286 -
Car05g01704 456 PANTHER HISTONE DEACETYLASE 13 444 - -
Car05g01704 456 PANTHER HISTONE DEACETYLASE 6 13 444 - -
Car05g01704 456 MobiDBLite consensus disorder prediction 418 433 - -
Car05g01704 456 Gene3D Histone deacetylase domain 19 407 IPR037138 -
Car05g01704 456 PRINTS Histone deacetylase signature 48 65 IPR003084 GO:0004407|GO:0016575
Car05g01704 456 PRINTS Histone deacetylase signature 137 157 IPR003084 GO:0004407|GO:0016575
Car05g01704 456 PRINTS Histone deacetylase signature 254 272 IPR003084 GO:0004407|GO:0016575
Car05g01704 456 PRINTS Histone deacetylase signature 116 133 IPR003084 GO:0004407|GO:0016575
Car05g01704 456 PRINTS Histone deacetylase signature 81 99 IPR003084 GO:0004407|GO:0016575
Car05g01704 456 PRINTS Histone deacetylase signature 237 250 IPR003084 GO:0004407|GO:0016575
Car05g01704 456 PRINTS Histone deacetylase signature 178 194 IPR003084 GO:0004407|GO:0016575
Car05g01704 456 MobiDBLite consensus disorder prediction 397 411 - -
Car05g01704 456 MobiDBLite consensus disorder prediction 396 456 - -
Car05g01704 456 CDD HDAC_classI 32 341 - -
Car05g01704 456 PIRSF HDAC_I_euk 11 454 IPR003084 GO:0004407|GO:0016575
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01704 Car-Chr5 61941244 61945254 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01704 K06067 - gmx:100801159 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01704 05 61941244 61945254 Car05g01704 05 61941244 61945254 ECH