Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01702 ATGGCCTCAGCTTCGCAAAAGACGACGTCTCCTCCTTGCTGTCCCCCCGGCGACTCTTCCCGCTTAGCTGTTTCCTCCATCGTTAAGCCACAAGATCGCATCGCTAATAACGTTGCCTTGATTCGCCCTCTCGATTCGCTTCCTGAATCTTCCACCACCAATGCTCCTACTGCTAAGGGAATAACTTCACTGACAAGGCCTCAGTCAAGTCATCCTTTGGACCCTTTATCTGCTGCTGAAATATCTGTGGCAGTGGCAACTGTGAGGGCTGCTGGAGCCACTCCAGAGCTTAGAGATAGTATGCGCTTCATTGAAGTAGTTTTGCTGGAACCAGATAAACATGTTGTTGCACTGGCAGATGCTTATTTTTTTCCACCTTTCCAACCATCATTACTTCCTAGAAGTAAAGGAGGGCCTGTAATTCCCACTAAGCTCCCTCCGAGATGCTCTAGACTTGTTGTTTACAATAAGAAATCAAATGAGACTGCTCTGTGGATTGTCGAATTATCACAAGTACATGCAGTAACTCGAGGTGGCCATCATCGAGGAAAAGTCATTTCATCACATGTTGTTCCTGATGTTCAGCCTCCAATGGATGCTGAGGAATATGCAGAATGCGAGGCTGTTGTTAAAAGTTATCCCCCATTTATAGAGGCTATGAAGAAAAGGGGTATCGAAGACATGGAAGTTGTTATGGTTGATCCCTGGTGTGTTGGTTATCATAGTGAAGCTGATGCTCCTGGTCGAAGACTTGCTAAACCACTCATATTTTGTCGGTCTGAGAGTGACTGCCCTATGGAAAATGGTTATGCCCGCCCAGTTGAGGGAATCTATGTTCTTGTTGATATGCAAAACATGGTGGTGATAGAGTTTGAAGACCGTAAACTTGTTCCTCTGCCCCCGGTTGATCCCTTGAGGAACTATACTCCTGGTGAATCCAGAGGTGGCTCGGATAGAAGTGATGTAAAACCCTTACAAATTGTTCAACCTGAAGGTCCAAGCTTTCGTGTCAATGGGTATTATGTTGAATGGCAGAAGTGGAATTTTCGTATTGGATTCACACCCAAAGAAGGGTTGGTTATATATTCTGTTGCGTATGTTGATGGTAGTCGGGGAAGACGGCCTGTTGCTCATAGGCTGAGTTTTGTGGAGATGGTTGTGCCCTATGGAGATCCCAATGATCCACATTATAGGAAAAATGCTTTTGATGCTGGGGAAGATGGCTTGGGAAAAAATGCGCATTCCCTCAAAAAGGGATGTGATTGTTTGGGCTACATCAAATATTTTGATGCCCACTTCACAAATTTCACTGGTGGAGTGGAAACTATCGAAAATTGTGTATGTATGCATGAAGAGGATCGTGGGATTCTCTGGAAACATCAAGACTGGAGAACTGGCTTAGCAGAAGTCCGAAGGTCTAGAAGACTTTCGGTTTCTTTTGTATGCACAGTGGCCAACTATGAGTATGCATTTTTTTGGCACTTTTATCAGGATGGAAAGATTGAAGCTGACGTCAAGCTAACTGGAATTCTCAGCTTAGGAGCCTTGATGCCTGGAGAATATCGAAAATATGGTACCATGATTGCACCTGGTCTATATGCTCCAGTTCATCAACATTTTTTTGTTGCACGTATGGACATGTCTGTCGATTCTAGACCTGGTGAAGCTTTGAATCAGGTTGTGGAGGTCAATATGAAAGTTGAAGAACCCGGTGAGAATAATATTCACAATAATGCATTCTATGCCGAAGAGACTTTGCTCAAATCTGAATCGGAAGCAATGCGTGATTGCAATCCTTTGACTGCTCGGCATTGGATTGTAAGGAACACAAGAACTGGCAATAGAACCGGACAATTGACCGGCTACAAGCTGGTACCAGGCTCAAACTGCTTGCCGTTGGCAGGTTCTGAGGCCAAGTTTTTAAGAAGAGCTGCTTTCTTGAAGCACAATGTTTGGGTAACAGCATATTCACGTGATGAAATGTTTCCTGGAGGAGAATTTCCCAATCAAAATCCACGAGTTGGCGAAGGATTAGCTACATGGATTAAGCAAGACCGATCGTTGGAAGAAACTAATATAGTTCTTTGGTATGTATTTGGAATCACGCATGTTCCTCGTCTGGAAGACTGGCCTGTCATGCCAGTAGAACATATTGGTTTCATGCTCATGCCTCATGGATTCTTCAATTGTTCCCCTGCGGTGGATGTGCCGCCTAGTTCATGTGAAGCGGAATCTAAAGACAATGACATCAAGGATAATGGTGCTCCCAAGCCAATTCCGAGCGGGTTAGCATCAAAGCTTTAG 2304 0.4449 MASASQKTTSPPCCPPGDSSRLAVSSIVKPQDRIANNVALIRPLDSLPESSTTNAPTAKGITSLTRPQSSHPLDPLSAAEISVAVATVRAAGATPELRDSMRFIEVVLLEPDKHVVALADAYFFPPFQPSLLPRSKGGPVIPTKLPPRCSRLVVYNKKSNETALWIVELSQVHAVTRGGHHRGKVISSHVVPDVQPPMDAEEYAECEAVVKSYPPFIEAMKKRGIEDMEVVMVDPWCVGYHSEADAPGRRLAKPLIFCRSESDCPMENGYARPVEGIYVLVDMQNMVVIEFEDRKLVPLPPVDPLRNYTPGESRGGSDRSDVKPLQIVQPEGPSFRVNGYYVEWQKWNFRIGFTPKEGLVIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCMHEEDRGILWKHQDWRTGLAEVRRSRRLSVSFVCTVANYEYAFFWHFYQDGKIEADVKLTGILSLGALMPGEYRKYGTMIAPGLYAPVHQHFFVARMDMSVDSRPGEALNQVVEVNMKVEEPGENNIHNNAFYAEETLLKSESEAMRDCNPLTARHWIVRNTRTGNRTGQLTGYKLVPGSNCLPLAGSEAKFLRRAAFLKHNVWVTAYSRDEMFPGGEFPNQNPRVGEGLATWIKQDRSLEETNIVLWYVFGITHVPRLEDWPVMPVEHIGFMLMPHGFFNCSPAVDVPPSSCEAESKDNDIKDNGAPKPIPSGLASKL 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01702 767 Pfam Copper amine oxidase, N2 domain 71 157 IPR015800 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Car05g01702 767 MobiDBLite consensus disorder prediction 1 15 - -
Car05g01702 767 MobiDBLite consensus disorder prediction 46 73 - -
Car05g01702 767 SUPERFAMILY Amine oxidase N-terminal region 69 197 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Car05g01702 767 SUPERFAMILY Amine oxidase N-terminal region 195 312 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Car05g01702 767 Gene3D Copper amine oxidase, catalytic domain 312 738 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Car05g01702 767 Gene3D - 200 303 - -
Car05g01702 767 MobiDBLite consensus disorder prediction 46 72 - -
Car05g01702 767 PANTHER COPPER AMINE OXIDASE 1 758 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Car05g01702 767 Pfam Copper amine oxidase, enzyme domain 325 733 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Car05g01702 767 Gene3D - 55 199 - -
Car05g01702 767 MobiDBLite consensus disorder prediction 738 767 - -
Car05g01702 767 MobiDBLite consensus disorder prediction 1 22 - -
Car05g01702 767 PANTHER AMINE OXIDASE 1 758 - -
Car05g01702 767 Pfam Copper amine oxidase, N3 domain 196 299 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Car05g01702 767 SUPERFAMILY Amine oxidase catalytic domain 319 738 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01702 Car-Chr5 61914467 61920585 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01702 K00276 - gmx:100798722 1384.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01702 05 61914467 61920585 Car05g01702 05 61914467 61920585 ECH
Car07g01087 07 9697668 9700199 Car05g01702 05 61914467 61920585 PCT