Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01696 ATGGTGAAGAAGTTATACGTGTGTGTATTAGAAGCCAAAGAATTGCCAGTTAAAAACTCTCGTGTGAAGCTTAAACTTGGCAAGTTAAAGTTCAAAACAAGGATATTGAAAAACACGTTCAGCCCCATTTGGAACGAAGAGTTTGTTTTCAAGGTGAACGATATTTCCGAGGAAGTGCTTGTTATCACTGTTGTTAATCACAGCGATGAATCAAAGGTGATCAACGGTTCTGGTTTAGTGGATTTTGTTGGTCAGGTTCGGATTCCGGTAATTGCTTTTCAGGATAAGGAAATTTTGCCGCCCACTTGGTTCTCCCTTCAATGCCCTAACAAGAGTGCCAAATTTGTCAACACATTTTGTGGGAAGATTCTCCTCACAATTTCCCTTCATTGCAAGGGCAATGCTAATTCTTTTATGAATCATAAGCATTCTCCAAACTCAGATATTGCAATTGAGAACTCAAGAGACTTAGAAGGTATTCACATTTCATCTCAACCACTTTCTCGTAAAATGGGAGAAGGCAAACACTTGTTGAAGGTTATTACTAATCGTCTTAATAGGATTCTAAATAAGAAAGAAGGAAACTCAAAATCTGCGGATTGTTCAGAAACTTCCAATTCATTATCTGATTATGAAGATAGTAACAGTGTACAGGAAAATTCACCCCCTTGTAGTTTTGAAGAAGGCATTGCAGTAATGGAGTCAAGAGATAGCCAACCAGAAAGTCCTGAAAATTTGCAGGGTGGTATTCTTGTAGATAAGATTTATGCAGTATCACCATACAATCTTAATATAGTACTTTTTGCGCCAAATTCGCAGTTTAGGAAAGATTTAGCAGAACTACAAGGAACAACAAATTTGCAAGAGGGAGCTTGGTCCTGGAAAGATGAAGACATGTCTTGTTTGACTAGAATTGTTTCGTATACAAAAGCTGCTTCAAAATTAGTTAAGGCTGTTAATGCCACTGAGGAGCAAACCTATATTAAAGTGACTAAAGATGAATATGCTGTACTTGTTAGTGTATGCACCCCCGAGGTTCCATACGGGAAATCATTTCGGGTTGAATTACTTTACAAGATAATGCCTGGAGGAGATGTGTCTTCTGAAGATGAATCCTCAAATCTTGTGGTGTCATGGGGAATTGTTTTCCTACAAAGCACAATGATGAAAGGTGTGATAGAGAGTGGGGCTAAACAAGGTTTGAAGGAGAGTTTTGACCAGTTTTCCGACTTACTTGGTCGGAGTTTCAAGGTGGTAGATAAGACGGATTTAATGAACAAAGAACATTTGTTGGCAACTTTGCAGACAGAAAGCCAGATGAATTGGTGGCAGGGCTTGGAATTTAGAGGGATTGAACTTCCAGATAGTTTTGGAGAATTAGTTACAAGTGGAATTTTAATTATCCAGTTGCAGCGTGTTTATGATATGGTGTCTCACTTTGTGCAAGCTAGATTTCAAATGGGCACTGACCATGGCCTGAAAGCACATGGTGATGGATGGGTTCTTACTGTAGCTTTAATTGAAGGGGTTGACCTGGCTTCATTAGAGTCAGTGGGGTTGTCAGATCCCTATGTGGTTTTCACCTGTAATGGACAAACAAGGTCAAGCTCTGTCAAGCTTGAGACATCAGATCCTCAATGGAATGAGATATTAGAGTTTGATGCTATGGAAGAACCGCCATCAGTTTTAGATGTTGAAGTTTTTGATTTTGATGGTCCATTTGACCAGGATGTTTCACTTGGACATGCTGAGATCAATTTCTTGAAGCACACGTCAACCGAATTGGCAGACATGTGGGTCATCCTTGAAGGAAAGCTCGCCCAGTCTGCTCAATCGAAGTTGCATTTGAGAATTTTCTTGGACAATAATAAAGGGGTTGAAACTATCAAGGATTATTTGGAGAAGAAGGAAAAGGAAGTAGGAAAAAAGTTGAATATTCAATCACCTCACAGAAATTCTACATTCCAGAAATTATTTGGGTTGCCAACAGAAGAATTTCTAATCAATGATTTCACATGTTATCTGAAGAGAAAAATGCCTTTACAGGGTCGGCTATTTCTTTCGGCAAGGATTCTGGGATTTTATGCCAATTTATTTGGACATAAAACCAAATTTTTCTTCCTTTGGGAAGATATTGAAAACATTCAAGTGCTTCCTCCATCATTGGCATCAATAGGAAGCCCTACATTGGTCATAATTCTTCGAAGCGGACGAGGTATTGATGCAAGGCATGGTGCCAAGGTGCAAGACGAAGAAGGAAGGCTTAGGTTTCATTTTCAGTCATTTGTTTCATTCGGTGCTGCCTCAAGAACAATAATAGGTTTATGGAGAGCACGAATATTGAACCCCTATCAGAAAGAACAAATTACAGAAGAGCATGAAGAACAAGAAGTCCTGGTAATACCTGAAGACTCTGGATCTATCCTAGAGGATGAAGCAAAAATGTCCAAGATTTACTCTGCTGAACTACCAATTAAGATGACATCGGTGATGGAAATTTTTTATGGAGGAAACCTAGAGCATAAGATTATGAAGAGAACCGGGTGTATGAACTATGACACTACATCTTGGGAACCAGTAAAACCTGATGTTCTCGAAAGGCACGTTTCTTACCAATTTAATCGACACGTGTCGGTTTTTGATGTCACAAGCACACAACAAAAATTTCCAAATACAAACACTGGAGGATGGATTGTGAATGAAGTTATGGTCCTTAACGGTGTACCATTTGCTGATCATTTTCGTATTCATTTTAGGTACGAAATTGAGAAATCAGTTCTTGGTGAATGTGCTTGCAAGTGTGATGTATACATTGGCATCAAGTGGCATAGGAGCTCTAAGTTTCAGCAAAGGATCAACCGGAACATAACTGCTAAGTTTAACATACGACTGAAGGAAATATTTGAACTGGTTCAGAAAGAGATTTTATTGATGTCACATAACTCGCATGGGTAA 2955 0.3895 MVKKLYVCVLEAKELPVKNSRVKLKLGKLKFKTRILKNTFSPIWNEEFVFKVNDISEEVLVITVVNHSDESKVINGSGLVDFVGQVRIPVIAFQDKEILPPTWFSLQCPNKSAKFVNTFCGKILLTISLHCKGNANSFMNHKHSPNSDIAIENSRDLEGIHISSQPLSRKMGEGKHLLKVITNRLNRILNKKEGNSKSADCSETSNSLSDYEDSNSVQENSPPCSFEEGIAVMESRDSQPESPENLQGGILVDKIYAVSPYNLNIVLFAPNSQFRKDLAELQGTTNLQEGAWSWKDEDMSCLTRIVSYTKAASKLVKAVNATEEQTYIKVTKDEYAVLVSVCTPEVPYGKSFRVELLYKIMPGGDVSSEDESSNLVVSWGIVFLQSTMMKGVIESGAKQGLKESFDQFSDLLGRSFKVVDKTDLMNKEHLLATLQTESQMNWWQGLEFRGIELPDSFGELVTSGILIIQLQRVYDMVSHFVQARFQMGTDHGLKAHGDGWVLTVALIEGVDLASLESVGLSDPYVVFTCNGQTRSSSVKLETSDPQWNEILEFDAMEEPPSVLDVEVFDFDGPFDQDVSLGHAEINFLKHTSTELADMWVILEGKLAQSAQSKLHLRIFLDNNKGVETIKDYLEKKEKEVGKKLNIQSPHRNSTFQKLFGLPTEEFLINDFTCYLKRKMPLQGRLFLSARILGFYANLFGHKTKFFFLWEDIENIQVLPPSLASIGSPTLVIILRSGRGIDARHGAKVQDEEGRLRFHFQSFVSFGAASRTIIGLWRARILNPYQKEQITEEHEEQEVLVIPEDSGSILEDEAKMSKIYSAELPIKMTSVMEIFYGGNLEHKIMKRTGCMNYDTTSWEPVKPDVLERHVSYQFNRHVSVFDVTSTQQKFPNTNTGGWIVNEVMVLNGVPFADHFRIHFRYEIEKSVLGECACKCDVYIGIKWHRSSKFQQRINRNITAKFNIRLKEIFELVQKEILLMSHNSHG 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01696 984 Gene3D C2 domain 1 132 IPR035892 -
Car05g01696 984 PANTHER C2 AND GRAM DOMAIN-CONTAINING PROTEIN 4 443 - -
Car05g01696 984 PANTHER C2 AND GRAM DOMAIN-CONTAINING PROTEIN 444 981 - -
Car05g01696 984 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
Car05g01696 984 Pfam VAD1 Analog of StAR-related lipid transfer domain 251 400 IPR031968 -
Car05g01696 984 Pfam VAD1 Analog of StAR-related lipid transfer domain 818 956 IPR031968 -
Car05g01696 984 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 500 625 IPR035892 -
Car05g01696 984 MobiDBLite consensus disorder prediction 199 223 - -
Car05g01696 984 CDD C2 5 106 - -
Car05g01696 984 SMART gram2001c 653 719 IPR004182 -
Car05g01696 984 Pfam C2 domain 4 97 IPR000008 -
Car05g01696 984 Pfam C2 domain 501 600 IPR000008 -
Car05g01696 984 Gene3D - 651 778 IPR011993 -
Car05g01696 984 SMART C2_3c 4 102 IPR000008 -
Car05g01696 984 SMART C2_3c 501 600 IPR000008 -
Car05g01696 984 CDD C2 502 602 - -
Car05g01696 984 MobiDBLite consensus disorder prediction 194 224 - -
Car05g01696 984 Gene3D C2 domain 484 620 IPR035892 -
Car05g01696 984 ProSiteProfiles C2 domain profile. 481 600 IPR000008 -
Car05g01696 984 PANTHER BNAA05G37250D PROTEIN 444 981 IPR044511 -
Car05g01696 984 PANTHER BNAA05G37250D PROTEIN 4 443 IPR044511 -
Car05g01696 984 Pfam GRAM domain 654 725 IPR004182 -
Car05g01696 984 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 134 IPR035892 -
Car05g01696 984 ProSiteProfiles VASt domain profile. 814 975 IPR031968 -
Car05g01696 984 ProSiteProfiles VASt domain profile. 247 420 IPR031968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01696 Car-Chr5 61772766 61778333 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01696 502 604 Acyl Lipid Metabolism Gene Families AT4G13550 30.476 1.08e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01696 - - gmx:100811103 1505.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01696 05 61772766 61778333 Car05g01696 05 61772766 61778333 ECH