Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01687 ATGGTGTCTTCCACTGGGGTTGCTACTGCACAACCTCTTTTTTCTTTTGGATTGATTTCTGACGTCCAATACGCTGACATTCCCGATGGTCGCTCATTCCTTGGTGTTCCACGGTATTATCGGCATAGTATTCTTGTTCTGCAGAGAGCAGTTAAAGAATGGAATACTCATCAGAAGCATAAGTTTGTGATTAATTTAGGAGATATTGTTGATGGGTTTTGTCCCAAAGATCAATCTATTAATGCTGTAAAGAAGGTTGTGGATGAATTTGAAATGTTTAGAGGACCTGTGTACCATATGATTGGCAATCACTGTCTGTACAATCTTCCTCGAAGCAAGTTACTTCCATTATTGAAGATTCAAACCCTTGATGGTCATGCTTACTATGATTTCTCACCGGTGCCTGACTATAGATTTGTAGTTCTCGATACCTATGACATCAGTGCCATTGGTTGGCCTCAAGATCATCCAAGAGCATTGGAAGCCATGCAATTGCTTAGAGAGAAGAACCCAAATGAAGATAAGAACAGTCCAACAAATTTGGTAGGGGTTGAAAGAAGGTTTCTTATGTTTAATGGAGGCGTTGGAAAGGAACAGATGGAATGGTTGGATGGTGTTCTTCAGGATGCAACCAAATTGAAACAGAAGGTGGTTGTGTCTAGCCATCTGCCTCTAGATCCTTGTGCAGCAACCGAGGAGGCACTATTGTGGAATTATGATGAAGTGATGAATTTGATACACAAATACAATTGTGTTAAGGTCTGTCTTGCTGGACATGATCATAAAGGTGGATACTCCATTGATTCTCATGGTGTACACCATAGAGTTCTTGAAGCTGCTCTTGAATGTCCTCCCGGCACAGATGCATTTGGAAGCGTTTATGTCTATGATGACAGAATATCACTTGTAGGAATTGACAGAATGGCGAGTACAGACATGTATTTTAGTCACCAATAA 957 0.4075 MVSSTGVATAQPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSILVLQRAVKEWNTHQKHKFVINLGDIVDGFCPKDQSINAVKKVVDEFEMFRGPVYHMIGNHCLYNLPRSKLLPLLKIQTLDGHAYYDFSPVPDYRFVVLDTYDISAIGWPQDHPRALEAMQLLREKNPNEDKNSPTNLVGVERRFLMFNGGVGKEQMEWLDGVLQDATKLKQKVVVSSHLPLDPCAATEEALLWNYDEVMNLIHKYNCVKVCLAGHDHKGGYSIDSHGVHHRVLEAALECPPGTDAFGSVYVYDDRISLVGIDRMASTDMYFSHQ 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01687 318 PANTHER MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE 1 318 - -
Car05g01687 318 Pfam Calcineurin-like phosphoesterase 15 262 IPR004843 GO:0016787
Car05g01687 318 PANTHER - 1 318 - -
Car05g01687 318 SUPERFAMILY Metallo-dependent phosphatases 12 312 IPR029052 -
Car05g01687 318 CDD MPP_Nbla03831 14 302 IPR041869 -
Car05g01687 318 Gene3D - 9 308 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01687 Car-Chr5 61679177 61681826 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01687 K01517 - gmx:100792911 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01687 05 61679177 61681826 Car05g01687 05 61679177 61681826 ECH
Car05g01687 05 61679177 61681826 Car07g01105 07 9813631 9815491 PCT