Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01679 ATGTTCCTGTCTTGCATTAAAACCATGAATATTATTATCCTATTCTTCTTGTTTTGTGTCGGATTAAGCCATGGTGCCAATCAAAAAACACCCTTCCATGGTAGAAAAGGACAGTGGCAACTGCTTCTCAAAAACACAGGTGTAGTTGGAATGCATATGGCATTAACCTACAAAAACACTGTCATAATGTTTGATCAAACAGGAGCAGGACAGTCTAGGTACAAACTTCGAAAACGATTCGATGGAACCATGTGTTCAACAAGCCGCAACGATTTAATTGATTCAACATGCTATGCTCATTCAATTGAGTATGATATCAGTTCCAATAGAATAAGACCTTTGAGGCTTGACACTGATCCTTGGTGTTCCTCTGGCTCTTTCTTAAGCAATGGAACACTTTTACAAATAGGAGGGTATCATCAAGGTGCTAAAAGAGTGAGATTCTATAGGCCTTGTGGGAATCATCAATGTGATTGGAAACAATCAAAGAAATCTTTATCTGATGAAAGATGGTATGCTTCTAGTCAGATTCTACCAGGACATGACAGAGTTGTTGTTGTTGGTGGAAGAAGAACTTTCACATATGAATTTGTACCCAAAATTAGTCCTAATGAAAAATCTTTTGAACTTCCATTTTTGCACCAAACTAATGACAGAAACTCAGAAGGGAACAACTTATATCCCTTCACTCACCTTTCATCCGACGGAAACTTGTTCGTTTTTGCTAACCGTGATTCGATCCTACTCAACCTGCGAAGAAACAAAGTAATCAAGACATTCCCTCGGATACCAGGAAAAGGGTCGAGAAACTACCCGAGTTCCGGCTCGTCGGTTTTACTCCCATTAGACCATAAAGACAAGTTCCAGAAAGTTGAAGTAATGGTATGTGGAGGTTCATCAACTGGAGCACTCAAAGCCGCTAGACGAAAAAGATTCATCGAAGGTTTAAGATCGTGCGGGAGAATGGTGATCACAGGGAATAAACACACTTGGGAAATGGATTACATGCCGAAACCGCGTTTCTTACAGGACATGTTGATTCTACCTACAGGAAATATCTTGATTATAAATGGTGCTAAACATGGTTGTGCAGGATATGACAATGCTAGAAATGCTTCACTTGAGCCTTATCTTTATAGTCCAAATAAAAGACTAGGAAAAAGGTTTAGAGTCCTTAAGGAAACAAAGATAGCTAGAATGTATCATTCATCAGCAACTCTTTTACCTGATGGAAGAGTATTAGTAGCTGGTGGTAATCCACATGGTAGATACACTTTTCATAATGTGGCATATCCAACAGAACTTAGACTTCAAGCATTTGTTCCACATTACATGGAAAAAAGGTATCATACTTGGAGGCCAAGTAACTTGACAATAGAACATGTTAGTGGTGGTGGTGGTGATAATCATGCAATTGGGTATGGTAAAGAGTTTAGTGTTAGATTTTTGTTGAGAAAAAGGGAAAATGATCATGAAGTGAAGTTTAGTGTTTATTCACCACCATTTACTACTCATGCTTTTGGTATGAATCAAAGGATGTTGAATTTGAGGTGTAAGAGAATGGTGAGAAGAAGTGAAGGGTGGGTGGATGCAGTGTTGGAAGCTCCACCATCATCATTTGTTGCACCTTCTGGTTATTACTTGCTTACGGTTGTGAATGGAGGAATTCCAAGTATGTCTCGGTGGATTCAGTTTGTGCATGCTTAG 1707 0.3907 MFLSCIKTMNIIILFFLFCVGLSHGANQKTPFHGRKGQWQLLLKNTGVVGMHMALTYKNTVIMFDQTGAGQSRYKLRKRFDGTMCSTSRNDLIDSTCYAHSIEYDISSNRIRPLRLDTDPWCSSGSFLSNGTLLQIGGYHQGAKRVRFYRPCGNHQCDWKQSKKSLSDERWYASSQILPGHDRVVVVGGRRTFTYEFVPKISPNEKSFELPFLHQTNDRNSEGNNLYPFTHLSSDGNLFVFANRDSILLNLRRNKVIKTFPRIPGKGSRNYPSSGSSVLLPLDHKDKFQKVEVMVCGGSSTGALKAARRKRFIEGLRSCGRMVITGNKHTWEMDYMPKPRFLQDMLILPTGNILIINGAKHGCAGYDNARNASLEPYLYSPNKRLGKRFRVLKETKIARMYHSSATLLPDGRVLVAGGNPHGRYTFHNVAYPTELRLQAFVPHYMEKRYHTWRPSNLTIEHVSGGGGDNHAIGYGKEFSVRFLLRKRENDHEVKFSVYSPPFTTHAFGMNQRMLNLRCKRMVRRSEGWVDAVLEAPPSSFVAPSGYYLLTVVNGGIPSMSRWIQFVHA 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01679 568 Gene3D - 33 450 IPR037293 -
Car05g01679 568 PANTHER ALDEHYDE OXIDASE GLOX-LIKE 8 567 - -
Car05g01679 568 CDD E_set_GO_C 472 564 IPR015202 -
Car05g01679 568 Pfam Galactose oxidase-like, Early set domain 470 564 IPR015202 -
Car05g01679 568 Gene3D Immunoglobulins 459 568 IPR013783 -
Car05g01679 568 PANTHER SECRETED PROTEIN-RELATED 8 567 - -
Car05g01679 568 SUPERFAMILY E set domains 469 564 IPR014756 -
Car05g01679 568 SUPERFAMILY Galactose oxidase, central domain 101 446 IPR011043 -
Car05g01679 568 Pfam Glyoxal oxidase N-terminus 51 298 IPR009880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01679 Car-Chr5 61613194 61615066 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01679 - - gmx:100814200 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01679 05 61613194 61615066 Car05g01679 05 61613194 61615066 ECH