Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01678 ATGACGATTACGGTTGTGCCTACGGTGAAGGACGAGTGCCTTATGGTAAGGGGCAACGTGATTCTGACACGTGTCCCCCAAAACATTGTGGTTTCCCCTGTTTCCACAAGCTCAGCTTTTCTAGGAGCAACTTCCCCAATTCCAAGCTCCCGTCACGTCTTCACTCTTGGCACTCTCCGGGGATATAGATCCGCGAGTGATGTTCCAATTGAAACTCAATTGCTTCTATTGGAAGCAAGAGAAGAGTCTGCTCTTAAGGAACAATTTTCTTTTGACTCTCAAGAGCCAGAGGAAGAGAACACTTCCTACATTCTCTTCTTGCCTGTGTTGGATGGAGCGTTTCGCGCAACTTTGCAGGGAACTGCATTAAACGAGCTCCAATTCTGCGTTGAAAGTGGAGATGCCTATGTTCAAACTTCTCAATCACTTGAGGCAGTATTTGTAAATTCAGGGGACAATCCGTTTGAGCTAATCAAGGATTCTATCAAGATATTGGAGAAACACAAAGGAACTTTTTGTCATCTTGAAAACAAGGAGATCCCTGTACATCTTGACTTGTTTGGATGGTGCACTTGGGATGCCTTTTACACTAAAGTAAATCCACAAGGAATAAAAGATGGCATTCAAAGTCTCTCAAGTGGAGGTTTTTCACCTAAGTTTATCATTGTTGATGATGGATGGCAAGAGACACTCAATGAATTTCTCAAAGAAGGTGAACCAATCATTGAAGGAACCCAGTTTGCAACAAGACTAATAGACATCAAAGAAAACAAAAAGTTCAGCAGTGCAGTCTCCAATAATTCTTGCAACAATCTCCATGATTTTGTTCACTCTATCAAACAGAATTCGAGTGTAAAATACGTTTATATGTGGCATGCTTTAGCTGGTTATTGGGGAGGAGCACTACCGTCTTCCGATGCGATGAAGAAATATAATCCAAAGCTTGTATATCCAATTCAGTCACCTGGTATCACAGGGAACCTTAGAGATATAGCCATGGACAGCTTGGAAAAATATGGAGTTGGAATCATTGATCCGTCAAAGTTATATGAGTTTTACAATGACTATCACAGTTATCTTGCAAGCTGTGGCGTCGATGGAGTTAAAGTAGATGTCCAAAATTTGATAGAAACCTTGGGTTCTGGGTACGGTGGACGCGTTGCATTAACCGAACGGTATCAAGAAGCACTAGAGGAATCAGTAGCAAGGAATTTTAAGGACAATAACCTCATTTGTTGCATGTCTCATAACTCTGATTCAATTTACAGTTCAAAGAAGAGTGCAGTGGCAAGAGCTTCTGAAGATTTCATGCCCAGGGAACCAACATTTCAAACCTTACACGTTGCATCGGTAGCTTTTAATAGTCTTCTTTTAGGGGAGATTTTTGTGCCAGACTGGGACATGTTCCATAGCAAGCATGAGACAGCCGAGTTCCATGCTGCAGCAAGAGCAATAGGTGGTTGTGCAGTATATGTTAGTGATAAGCCTGGCAATCATGATTTTAAAATCTTGAAGAAGCTAGTACTTCCTAATGGATCAGTCTTGAGAGCAAGATATGCCGGACGTCCAACTCGAGATTGTTTGTTTCAAGATCCAGTAATGGATGGTAGAAGTCTGCTGAAGATTTGGAACTTAAATAAGCTAACTGGGGTGATAGGAGTCTTTAATTGCCAAGGATCCGGAAGCTGGCCAATGAAATCATCGGAAGCCACACCAACACACTTAAGCATTTCAGGGAAAGTTAGACCCCTTGATGTTGAATTTCTTGAAGAGGTTGCAGGTGAAAATTGGAATGGAGATTGTGTACTATATGCCTTCAATGCAGGCTTGCTTTCCAAGCTACCAAGTAAAGAAAAACTAGAAGTATCCTTGGAGACTCTTCAATGTGAAGTATATACAGTATCTCCAATCAGGGTGTTTGGTCATGATGTGCAATTTGCACCAATTGGATTGCTTGACATGTACAATTCAGGAGGAGCTGTAGAAGAACTAACCTGCACAATTGATGTTGCACATTGTATAATAAAAATCAAAGGTAGAGGATGTGGTCGTTTTGGAGCCTATTCCAACGTTAAACCAACACGTTGTATGGTGGGCATGAAGGAGAAGGAGTTTTCGTACAGTTCTGAAGATGGGTTACTGACAATTAAACTTGATGGTGAGGGCAATTATAGGGACATAGAAGTTGTATTCTGA 2196 0.4144 MTITVVPTVKDECLMVRGNVILTRVPQNIVVSPVSTSSAFLGATSPIPSSRHVFTLGTLRGYRSASDVPIETQLLLLEAREESALKEQFSFDSQEPEEENTSYILFLPVLDGAFRATLQGTALNELQFCVESGDAYVQTSQSLEAVFVNSGDNPFELIKDSIKILEKHKGTFCHLENKEIPVHLDLFGWCTWDAFYTKVNPQGIKDGIQSLSSGGFSPKFIIVDDGWQETLNEFLKEGEPIIEGTQFATRLIDIKENKKFSSAVSNNSCNNLHDFVHSIKQNSSVKYVYMWHALAGYWGGALPSSDAMKKYNPKLVYPIQSPGITGNLRDIAMDSLEKYGVGIIDPSKLYEFYNDYHSYLASCGVDGVKVDVQNLIETLGSGYGGRVALTERYQEALEESVARNFKDNNLICCMSHNSDSIYSSKKSAVARASEDFMPREPTFQTLHVASVAFNSLLLGEIFVPDWDMFHSKHETAEFHAAARAIGGCAVYVSDKPGNHDFKILKKLVLPNGSVLRARYAGRPTRDCLFQDPVMDGRSLLKIWNLNKLTGVIGVFNCQGSGSWPMKSSEATPTHLSISGKVRPLDVEFLEEVAGENWNGDCVLYAFNAGLLSKLPSKEKLEVSLETLQCEVYTVSPIRVFGHDVQFAPIGLLDMYNSGGAVEELTCTIDVAHCIIKIKGRGCGRFGAYSNVKPTRCMVGMKEKEFSYSSEDGLLTIKLDGEGNYRDIEVVF 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01678 731 Pfam Raffinose synthase or seed imbibition protein Sip1 9 717 IPR008811 -
Car05g01678 731 SUPERFAMILY (Trans)glycosidases 184 516 IPR017853 -
Car05g01678 731 Gene3D Aldolase class I 184 509 IPR013785 -
Car05g01678 731 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 731 - -
Car05g01678 731 PANTHER - 1 731 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01678 Car-Chr5 61608020 61612070 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01678 1 718 Glycoside Hydrolase AT1G55740 46.400 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01678 - - gmx:100816978 1234.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01678 05 61608020 61612070 Car05g01678 05 61608020 61612070 ECH