Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01676 ATGAATGTTCGGTACTATTTCCCTGTATCGGTGGCGTATGATTCCCGCGCGTGTTACGAAGCAGCAACAACAAAACCAACTAATCACTCTCTTTCTCTAACCCTCTTACACCACCGTTCTCTTTCTCTTCCCTTCTTCCAAAACCCTAATTTCCTCACGGGAAACACTATGCAGCGATTCTGCTCCGTGAATGGCATAAGTAAGAACAGAGCAATGGTGGAGAGGTTGCAGCATTTTGGAGTAATCACATCAAGCAAGGTGGCTGAAGTAATGGAGACTGTTGATAGAGCTTTGTTTGTACCTAGTGGATCAGCTCCTTATGATGACAGCCCAATGGCCATAGGCTACAATGCCACTATATCTGCACCTCATATGCATGCTACCTGCCTTCAGTTGCTGGAGGAGAATTTGCAACCTGGGATGCGCGCTCTCGACGTTGGCTCTGGAACAGGGTATCTGACTGCGTGTTTTGCCTTGATGGTTGGACCCCGAGGCCGTGCTGTTGGTGTAGAGCATATTCCTGAATTGGTTTCTTTTGCAATAGAAAATATTCAGAAAAGTGCTGCAGCTACACTATTGAAAGATGGTTCCCTTTTTGTTCATGTTGGTGGTATGATTTCTGAAATTTCTGTGAATCTGAAAGATTGA 648 0.4522 MNVRYYFPVSVAYDSRACYEAATTKPTNHSLSLTLLHHRSLSLPFFQNPNFLTGNTMQRFCSVNGISKNRAMVERLQHFGVITSSKVAEVMETVDRALFVPSGSAPYDDSPMAIGYNATISAPHMHATCLQLLEENLQPGMRALDVGSGTGYLTACFALMVGPRGRAVGVEHIPELVSFAIENIQKSAAATLLKDGSLFVHVGGMISEISVNLKD 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01676 215 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 11 203 IPR000682 GO:0004719|GO:0036211
Car05g01676 215 Gene3D Vaccinia Virus protein VP39 64 209 IPR029063 -
Car05g01676 215 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 69 190 IPR029063 -
Car05g01676 215 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 11 203 - -
Car05g01676 215 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 68 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01676 Car-Chr5 61596026 61599563 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01676 K00573 - gmx:100810913 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01676 05 61596026 61599563 Car05g01676 05 61596026 61599563 ECH
Car07g01112 07 9898875 9901278 Car05g01676 05 61596026 61599563 PCT