Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01675 ATGGCTAGCTATCCTCGCCAGTTACCAGCTGCTCCTAACAAAATGCAGCTTAAGAAGGAGAGACGAATGTTCTCTACATCTGATGACAGTGCCATGATGAAACAAGTTCAGTCCACTCATGCTCCTGATGGTCGTGAAATTGATGTCAAACCCCTTATCCAAATTGTTGATGAAATTTTGATTCAAATCATTGCTCGCAGCGTTGAGGGTCATGATCGTGTAAAACCTGAACAAGAGACAATGGAAACCGCTGCTGCTTTGGCTGAATTTGATATGCTTGACGCTTTGGCTTTTATCATTAACAAAATTTCTTGTGAGCTTTCATGCAAATGCTCAGGAGGTGGAGATGCACATGCATCAACAATGGTGTTACTGAATTACCTTTCTAGCTATCCTTGGCATGCAAAAGTTGTGTTAACCTTAGCAGCTTTTGCTGTTATTTTTGGGGAGTTTTGGCTTGTTGCTCAGTCAAGTGGATCAAACACACTTGCCAAATCTGTAGCTCTCCTTAAGCAACTTCCTGACATTGTTGAGAATTCTGTTTCATTGAGACCTCAATTTGATGCACTCAATAAGCTTGTGAAGGCTGCACTTGATGTTACTATGTGCATTGTTGAATTCAAGGAGTTGCCATCTGAATATATTTCAGAAGATGTTCCTCCTATGTCTGTTGCAAGTGCTCATATTCCTATTGCTGCTTATTGGGTTATTAGAAGTATTGTGGCTTGTGCCTCACAAATTGCAAGTCTCATTGGCATGAGAAATGAGGCCATCTCATCAGCCACAGAGGCATGGGAGTTATCTAGTTTGGCTCACAAAGTCAATAGTATTTATGAGCACCTCAAGAACCAACTTGCTCTTTGCTACCAAGCTATAGATGAGAAGAGGCATATTGAGGCATTTCACAATCTGATTCGCCTTTTCGAGACAGTCCATGTAGACAACATGAAAATTATGAGAGCACTGATTTATGCAAAGGATGATATTCCACCACTTATAGATGGAACTACAAAATTAAAGGTTAGTCTTGAGGTACTAAGGAGGAAACATGTGTTACTTCTCATATCAGATCTTGATCTTTCACAAGAAGAGATTATGATACTTGATAATTTGTACAAAGATGCAAGATCAAGGGGTGAGACACACTATGAGATGGTGTGGATTCCTGTTGTGGACAAAGCAACATGGAATGAAGTGAATAAGCAAAAGTTTGAGTATCTTCAAGCATCAATGCCATGGTATAGTGTTCGAGATCCTTTCATCATTGAACCATCAGTGATTAAGTATATCAAAGAAGTGTGGAATTTCACAAAGAGAGCTATTCTAGTAGCACTTGATCCACATGGAAGATTGTCCTCTCAAAATGCTCTCCACATGATATGGATTTGGGGAAATTTGGCTTTCCCTTTCACACGTGAAAAAGAAGAGTCCTTGTGGAAGCAAGAGATTTGGAGCCTCGAGCTTCTTGTTGATGGCATTGATCCCACAGTTTTGGATTGGATGACAGAAGGAAAAATCATATGTCTATATGGAGGTGAAGATCTTGAATGGATAGAAACATTCACACAAACAGCAATGAATCTAGCAAGAACAGGCAACTTTGATTTAGAGATGGTATACGTAGGAAAAAGCAATGCAAAAGAGAGGATGCAAAGAATGATAAGCACCTTCAACACAAAGAAATTCAGCTACTTTTGGCCTAATGTAACATCCATTTGGTTCTTTTGGGCAAGACTAGAGAGCATGTTATACTCAAAATTACAACAAGGAAAGACAGTTGAAAATGACAAGATAATGAGTGAAGTGATGACAGTGCTTAGCTTTGATGGTAGTGACAGAGGTTGGGCTATATTCTGTAGAGGACCATCTGAAATGGCTAGAGCTAAAGGTGACACTGCATTAACAAGTTTGAGAGATTTTGATAAATGGAAGCATAAGATTGAACAAGATGGTTGGGTTCCAGCATTGGGTGAGTATATTAAGGAAATTCAACAACCACATCATTGTAATCGTCTTATATTACCTGGGAGCACTGGTGGAATACCACAGAAAGTTGTTTGTGCTGAATGTGGGCGTCAAATGGAGAAATATTTCATGTATCGTTGCTGTGTGGAGTGA 2118 0.3957 MASYPRQLPAAPNKMQLKKERRMFSTSDDSAMMKQVQSTHAPDGREIDVKPLIQIVDEILIQIIARSVEGHDRVKPEQETMETAAALAEFDMLDALAFIINKISCELSCKCSGGGDAHASTMVLLNYLSSYPWHAKVVLTLAAFAVIFGEFWLVAQSSGSNTLAKSVALLKQLPDIVENSVSLRPQFDALNKLVKAALDVTMCIVEFKELPSEYISEDVPPMSVASAHIPIAAYWVIRSIVACASQIASLIGMRNEAISSATEAWELSSLAHKVNSIYEHLKNQLALCYQAIDEKRHIEAFHNLIRLFETVHVDNMKIMRALIYAKDDIPPLIDGTTKLKVSLEVLRRKHVLLLISDLDLSQEEIMILDNLYKDARSRGETHYEMVWIPVVDKATWNEVNKQKFEYLQASMPWYSVRDPFIIEPSVIKYIKEVWNFTKRAILVALDPHGRLSSQNALHMIWIWGNLAFPFTREKEESLWKQEIWSLELLVDGIDPTVLDWMTEGKIICLYGGEDLEWIETFTQTAMNLARTGNFDLEMVYVGKSNAKERMQRMISTFNTKKFSYFWPNVTSIWFFWARLESMLYSKLQQGKTVENDKIMSEVMTVLSFDGSDRGWAIFCRGPSEMARAKGDTALTSLRDFDKWKHKIEQDGWVPALGEYIKEIQQPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCCVE 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01675 705 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 13 704 - -
Car05g01675 705 Pfam Sieve element occlusion N-terminus 27 312 IPR027942 -
Car05g01675 705 Pfam Sieve element occlusion C-terminus 474 703 IPR027944 -
Car05g01675 705 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 13 704 IPR039299 GO:0010088
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01675 Car-Chr5 61590360 61594381 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01675 - - gmx:100811452 1192.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01675 05 61590360 61594381 Car05g01675 05 61590360 61594381 ECH