Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01668 ATGGCTACAAGTGAAGGAGGCGATGAACACAAAAACCCTGCTTTTGACCCGGATTTGGATACACCAGAAAACCCGGATCACGAGTTTGGTGAGTTCGGTGCGGGTTGTTTCTGGGGTGTGGAATTGGCCTTTCAACGAGTTGTGGGAGTGGTGAAAACAGAGGTTGGATATTCACAAGGTCACACACCAGATCCTAACTACAAACTGGTCTGCACCGGATCCACCAACCACGTGGAAGTGGTTCGGGTTCAATTTGACCCGAAAATTTGTCCATACACAAATCTCTTGGATCTCTTTTGGTCACGACATGACCCCACTACCCTCAATCGTCAGAGAGAAGATGTGGGTGCACAATATAGATCAGGAGTATACTACTTCAATGAAACCCAAGCTCGTTTAGCCCAAGAATCAAAAGAAGCTAAACAATTGGAACACAAGGACAAGATTGTAACAGAAATACTTCCAGCAAAGAGATTTTATAGAGCAGAGGAATATCATCAGCAATATTTGGAGAAGGGTGGAGGCAAAGGCCTTAATCAATCTGCTGAAAAGGGATGCACTGATCCCATAAGGTGCTACGGTTGA 585 0.4513 MATSEGGDEHKNPAFDPDLDTPENPDHEFGEFGAGCFWGVELAFQRVVGVVKTEVGYSQGHTPDPNYKLVCTGSTNHVEVVRVQFDPKICPYTNLLDLFWSRHDPTTLNRQREDVGAQYRSGVYYFNETQARLAQESKEAKQLEHKDKIVTEILPAKRFYRAEEYHQQYLEKGGGKGLNQSAEKGCTDPIRCYG 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01668 194 Pfam Peptide methionine sulfoxide reductase 32 173 IPR002569 GO:0008113
Car05g01668 194 SUPERFAMILY Peptide methionine sulfoxide reductase 24 175 IPR036509 GO:0008113
Car05g01668 194 MobiDBLite consensus disorder prediction 1 26 - -
Car05g01668 194 Coils Coil 126 146 - -
Car05g01668 194 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 27 184 IPR002569 GO:0008113
Car05g01668 194 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 9 194 - -
Car05g01668 194 TIGRFAM msrA: peptide-methionine (S)-S-oxide reductase 31 172 IPR002569 GO:0008113
Car05g01668 194 Gene3D Peptide methionine sulphoxide reductase MsrA 17 194 IPR036509 GO:0008113
Car05g01668 194 MobiDBLite consensus disorder prediction 9 26 - -
Car05g01668 194 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE FAMILY PROTEIN 9 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01668 Car-Chr5 61532491 61534388 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01668 K07304 - gmx:100527085 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01668 05 61532491 61534388 Car05g01668 05 61532491 61534388 ECH