Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01661 ATGGCAGAGAAGTTGGGAGGTTCTACAAAACTCGTGGTTTTGGCTGACCTAAACGTTGATCCTCCAGAAACCGACGACGACGACTCTTCACTTCTTCCTCCTCCACCCACTGAAGTTTCCAGgtcgataattgatGAAAACAGTCAAGATAAGAGTTTGTTGTCCAAAGACACCGATAGCATTGAAGGCGAAGGTAAAAAGTTGAACAAACTGGGGAAATGCCGTTCCAAACCTAGCAAGACAGACTCTTCTATTGATTGTGGAGCTGATGCAGATGGTGATCAACATGTCCAAGGGACTCCTTCATCTCGGGAGGAAAAAGTTAGCAGCATGAAGACTGGCTTGGTTCATGTTGCAAGGAAGATGCCCAAAAATGCCCATGCTCATTTTATACTTGGCTTGATGTACCAAAGATTAAACCAACCTCAAAAGGCTATATTGGCTTATGAGAAGGCAGAAGAGATATTACTCAGGCCTGAGGCTGAGATTGATAGGCCAGAGTTCCTTTCTTTAGTTCAGATTCACCATGCACAGTGCCTGATAATAGAAAGTTCATCAGAAAATAATTCAGACAAAGAACTTGAACCTCATGAACTTGAGGAAATTCTTTCTAAACTGAAAGAATCAATACAATCAGATATCAGACAGGCAGCTGTATGGAATACGCTGGGTTTTATCCTTCTTAAAACTGGTCGTGTGCAGAGTGCTATCTCAGTGTTGTCATCCCTGTTGGCCATTGCACCAGAGAACTATGATTGCCTAGGTAATCTTGGGGTAGCTTATCTTCAAATAGGAAATTTGGAATTATCTGTCAAGTGTTTCCAAGAGCTGATCCTAAAAGATCAAAACCACCCTGCAGCTTTGGTCAATTATGCTTCCCTTCTTTTGTGTAAATATGCTTCAGTTGTAGCAGGTGCTGGTGCAAGTGCTGCTGAAGATGCTTTGGCAGAACAGTCCACGGCTGCTAATGCTGCTAAGGAATGTTTGTTTGCTGCCATTAAAGCAGATGGAAAATCAGCTCATATTTGGACAAATCTTGCCTATGCATTTTCTATTACTGGTGATCATCGAAGTTCCAGCAAGTGCTTGGAGAAGGCGGCAAAGCTGGAACCCAATTGCATGTCTACTCGATATGCTGTTGCTATCCATCGAATAAAGGAGGCAGAAAGATCTCAAGATCCTAGTGAACTGCTTTCTTGTGCTGGAAATGAGATGGCTTCCATTATAAGAGATGGTGATTCATCCTTGGTTGAGCTTCCATTAGCATGGACCGGGCTTGCAATGGTTCACAAGGCTCAGCATGAGATAGCAGCAGCATATGAAAGTGAACAGTATGGGCTGACAGAAATCGAAGAGCGTGCTGTTTCCAGTCTAAAGCAGGCCATAGCAGAACATCCAGATGATGCGGTGCAGTGGCACCAACTTGGCGTTCATACTCTTAGTGCTAGGCAATTCAAAACATCACAAAAATACTTCAAAGCTGCTGTTGCCTGTGACAAGGACTGCTGCTATGCATGGTCTAACCTCGGTATCTCACTTCAACTATCAGAAGAACCATCACAAGCTGAAGAAGTATACAAGCGGGCTTTGTCTTTGGCAACAACACAAGAAGCGCATACTATACTATCCAATTTGGGAATTCTATATCGCCATCAGAAAAAGTATCAACTTGCGAAAGCTATGTTTACAAAGTCACTTGAACTACAACCTGGGTATGCTCCTGCATTCAACAATTTAGGTCTTGTTTTTGTTGCAGAGGGTCTTTTAGAAGAGGCCAAATATTGTTTTGAGAAAGCACTCGAATCAGATCCGTTGCTGGATGCAGCCAAGTCTAACTCGATTAAGGTTGTCACAATGTCCAAGTTATGCAAAGGCCTCTCCTCATGCAATCTTTAA 1896 0.4272 MAEKLGGSTKLVVLADLNVDPPETDDDDSSLLPPPPTEVSRSIIDENSQDKSLLSKDTDSIEGEGKKLNKLGKCRSKPSKTDSSIDCGADADGDQHVQGTPSSREEKVSSMKTGLVHVARKMPKNAHAHFILGLMYQRLNQPQKAILAYEKAEEILLRPEAEIDRPEFLSLVQIHHAQCLIIESSSENNSDKELEPHELEEILSKLKESIQSDIRQAAVWNTLGFILLKTGRVQSAISVLSSLLAIAPENYDCLGNLGVAYLQIGNLELSVKCFQELILKDQNHPAALVNYASLLLCKYASVVAGAGASAAEDALAEQSTAANAAKECLFAAIKADGKSAHIWTNLAYAFSITGDHRSSSKCLEKAAKLEPNCMSTRYAVAIHRIKEAERSQDPSELLSCAGNEMASIIRDGDSSLVELPLAWTGLAMVHKAQHEIAAAYESEQYGLTEIEERAVSSLKQAIAEHPDDAVQWHQLGVHTLSARQFKTSQKYFKAAVACDKDCCYAWSNLGISLQLSEEPSQAEEVYKRALSLATTQEAHTILSNLGILYRHQKKYQLAKAMFTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKYCFEKALESDPLLDAAKSNSIKVVTMSKLCKGLSSCNL 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01661 631 Pfam Tetratricopeptide repeat 227 286 - -
Car05g01661 631 SMART tpr_5 340 373 IPR019734 GO:0005515
Car05g01661 631 SMART tpr_5 503 536 IPR019734 GO:0005515
Car05g01661 631 SMART tpr_5 573 606 IPR019734 GO:0005515
Car05g01661 631 SMART tpr_5 126 159 IPR019734 GO:0005515
Car05g01661 631 SMART tpr_5 469 502 IPR019734 GO:0005515
Car05g01661 631 SMART tpr_5 217 250 IPR019734 GO:0005515
Car05g01661 631 SMART tpr_5 251 284 IPR019734 GO:0005515
Car05g01661 631 SMART tpr_5 539 572 IPR019734 GO:0005515
Car05g01661 631 SMART tpr_5 420 453 IPR019734 GO:0005515
Car05g01661 631 Gene3D Tetratricopeptide repeat domain 193 317 IPR011990 GO:0005515
Car05g01661 631 ProSiteProfiles TPR repeat profile. 217 250 IPR019734 GO:0005515
Car05g01661 631 Gene3D Tetratricopeptide repeat domain 531 612 IPR011990 GO:0005515
Car05g01661 631 MobiDBLite consensus disorder prediction 16 109 - -
Car05g01661 631 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN 8 630 - -
Car05g01661 631 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 8 630 - -
Car05g01661 631 Pfam Tetratricopeptide repeat 539 601 - -
Car05g01661 631 MobiDBLite consensus disorder prediction 50 80 - -
Car05g01661 631 ProSiteProfiles TPR repeat profile. 539 572 IPR019734 GO:0005515
Car05g01661 631 Pfam Tetratricopeptide repeat 340 373 IPR019734 GO:0005515
Car05g01661 631 Pfam Tetratricopeptide repeat 126 155 IPR019734 GO:0005515
Car05g01661 631 ProSiteProfiles TPR repeat profile. 340 373 IPR019734 GO:0005515
Car05g01661 631 Gene3D Tetratricopeptide repeat domain 318 407 IPR011990 GO:0005515
Car05g01661 631 SUPERFAMILY TPR-like 466 604 IPR011990 GO:0005515
Car05g01661 631 ProSiteProfiles TPR repeat profile. 573 606 IPR019734 GO:0005515
Car05g01661 631 Gene3D Tetratricopeptide repeat domain 115 171 IPR011990 GO:0005515
Car05g01661 631 Gene3D Tetratricopeptide repeat domain 417 530 IPR011990 GO:0005515
Car05g01661 631 SUPERFAMILY TPR-like 217 507 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01661 454 605 Glycosyltransferase AT3G04240 24.837 1.04e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01661 - - gmx:100820184 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01661 05 61454100 61459967 Car05g01661 05 61454100 61459967 ECH