Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01660 ATGATCAATCCGTGTATGCAAATGCAAGTGAAGGCTATGGCCATGGCAACAGCAAATAGCCTCATCTCCATTTCCACTACTTCACTGTTGAGTCGAAcaccatcacctcatcatcatcatcaACCAAAGACAACAACGTTAAATAGTCTCCTAAAACACAACAAGGACCATCATCAACAACAGACAACTCCACCATCCTCTTTCACTGTCGGTGCTCTTAAGATATCAACTCCTTCAATCAGAAGGCGTAGGTTGATTTGCTCAGCATCAGCATCTTCCTCTTCCACTTTTCCCTCAGCTCTTCTCTTTGACTGTGATGGTGTCCTCGTTGACACCGAAAAAGATGGCCACCGCATTTCTTTCAACGATACCTTCCAAGAGAAAGAACTAGGCGTTACCTGGGACGTGGAACTGTACGGTGAATTGCTCAAAATTGGAGGTGGAAAAGAAAGGATGACAGCGTACTTTAACAAAACCGGTTGGCCTGCGAATGCCCCGACGGGTGAACAAGAAAGAAAAGATTTCATAGCCTCACTTCACAAGCGAAAGACAGAACTATTCATGGCACTTATTGAGAAAAAACTCTTGCCTCTTCGCCCAGGTGTTGCAAAGCTTATTGATCAGGCTTTAGCTCAAGGAGTCAATGTTGCAGTTTGCAGCACTTCCAATGAGAAGGCGGTCTCTGCAATAGTATCATTTTTACTGGGACCTGAGCGAGCAGAAAAAATCCAGATATTTGCAGGAGACGTGGTTCCCCGCAAAAAGCCTGATCCGGCCATCTATCTACTAGCAGCCAGCACTCTCGGTGTCGAACCTTCAAGATGTGTTGTCGTCGAGGATAGTAACATAGGCTTAGCAGCTGCTAAAGCAGCTGGAATGAAGTGTATCGTAACAAAGAGCGGGTATACAGCAGATGAAGATTTCTTAAATGCAGATGCTGTATTTGACTTCATTGGTGATCCTCCTGAGGAGAGATTTGATTTGGCATTTTGTGGTAGCCTTCTTGAGAAGCAATATGTCAGCTAG 1026 0.4376 MINPCMQMQVKAMAMATANSLISISTTSLLSRTPSPHHHHQPKTTTLNSLLKHNKDHHQQQTTPPSSFTVGALKISTPSIRRRRLICSASASSSSTFPSALLFDCDGVLVDTEKDGHRISFNDTFQEKELGVTWDVELYGELLKIGGGKERMTAYFNKTGWPANAPTGEQERKDFIASLHKRKTELFMALIEKKLLPLRPGVAKLIDQALAQGVNVAVCSTSNEKAVSAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYLLAASTLGVEPSRCVVVEDSNIGLAAAKAAGMKCIVTKSGYTADEDFLNADAVFDFIGDPPEERFDLAFCGSLLEKQYVS 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01660 341 SFLD Haloacid Dehalogenase 97 324 - -
Car05g01660 341 CDD HAD_CbbY-like 100 300 - -
Car05g01660 341 Gene3D Putative phosphatase; domain 2 112 196 IPR023198 -
Car05g01660 341 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 182 297 IPR006439 -
Car05g01660 341 PANTHER XYLULOSE-1,5-BISPHOSPHATE (XUBP) PHOSPHATASE 63 340 IPR044999 GO:0016787
Car05g01660 341 Gene3D - 100 316 IPR023214 -
Car05g01660 341 Pfam Haloacid dehalogenase-like hydrolase 101 297 IPR041492 -
Car05g01660 341 SUPERFAMILY HAD-like 99 317 IPR036412 -
Car05g01660 341 SFLD phosphoglycolate phosphatase 97 324 - -
Car05g01660 341 PANTHER CBBY-LIKE PROTEIN 63 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01660 Car-Chr5 61450119 61453527 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01660 - - gmx:100816266 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01660 05 61450119 61453527 Car05g01660 05 61450119 61453527 ECH