Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01659 ATGAAACGATTTTTCCAAGTAGTAGAGAAAGATTCAGCGGGATGTTTgaagaagccgaaaggagatgagaatgaaaaagaagaagaaaatgaaacaaagaaagaGCCATTGAAATTCCTGACTTGGAACGCCAATAGTTTATTCCTTCGCGTTAAGAACAATTGGTCCGAATTCTCCAAATTCATTACCACATTCGATCCCGATGTCATTGCCATTCAAGAAGTTCGAATGCCCGCTGCTTCTTCCAATTCCAATTCCAAGTCCGCTCCTAAAAATCAAGATCAAATTAAAGATGATACTAACTCCTCCAGAGAAGAAAAAAGGATATTGGTGCGTGCACTTTCAAATCCACCGTTTGGGAACTATCGTGTTTGGTGGTCACTCGCAGATTCAAAGTATGCAGGGACAGCACTATTTGTGAAAAAATGTTTCAAGCCAAAAAGTGTTGTTTTCAATCTTGATAAAACAGCTTCAAAACATGAACCAGATGGCCGAGTAATCTTAGCTGAATTTGAAACACTTCGTTTATTGAATACATATGTTCCAAATAATGGGTGGAAAGAGGAGGCAAACTCATTTCAAAGGAGAAGAAAATGGGACAAAAGGATCCTGGAATTTGTCAACCAAAATTCAGACAAGCCTTTAATATGGTGTGGGGATCTGAATGTCAGCCATGAAGAGATCGATGTGAGTCATCCAGAGTTTTTCAGTGCAGCAAAACTCAATGGTTATGTTCCTCCAAATAAAGAGGATTACGGGCAACCTGGATTTACCTTGGCCGAAAGAGCGCGATTTGGTACCATCTTAAAAGAGGGAAAGCTGGTAGATGCCTACAGATTTTTGCACAAGGATAAGGACATGGAGCAGGGCTTCTCATGGTCTGGAAACCCAATTGGGAAGTACCGTGGGAAACGGATGAGAATAGACTATTTTGTAGTTTCAGAAGAACTTAAAGAAAAGATTGTTGCATGTGAAATGCATGGACAAGGGATAGAGTTACAAGGTTTCTATGGAAGTGATCATTGTCCGGTTACATTGGAGCTCTCTCCTAGTTCCAACTCTCAAAATGAGGATATAAGTACTTAG 1086 0.3821 MKRFFQVVEKDSAGCLKKPKGDENEKEEENETKKEPLKFLTWNANSLFLRVKNNWSEFSKFITTFDPDVIAIQEVRMPAASSNSNSKSAPKNQDQIKDDTNSSREEKRILVRALSNPPFGNYRVWWSLADSKYAGTALFVKKCFKPKSVVFNLDKTASKHEPDGRVILAEFETLRLLNTYVPNNGWKEEANSFQRRRKWDKRILEFVNQNSDKPLIWCGDLNVSHEEIDVSHPEFFSAAKLNGYVPPNKEDYGQPGFTLAERARFGTILKEGKLVDAYRFLHKDKDMEQGFSWSGNPIGKYRGKRMRIDYFVVSEELKEKIVACEMHGQGIELQGFYGSDHCPVTLELSPSSNSQNEDIST 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01659 361 CDD Ape1-like_AP-endo 37 348 - -
Car05g01659 361 Gene3D Endonuclease/exonuclease/phosphatase 7 350 IPR036691 -
Car05g01659 361 PANTHER DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 27 352 - -
Car05g01659 361 TIGRFAM xth: exodeoxyribonuclease III (xth) 37 348 IPR004808 GO:0004518|GO:0006281
Car05g01659 361 MobiDBLite consensus disorder prediction 15 34 - -
Car05g01659 361 MobiDBLite consensus disorder prediction 80 104 - -
Car05g01659 361 Pfam Endonuclease/Exonuclease/phosphatase family 40 341 IPR005135 GO:0003824
Car05g01659 361 ProSiteProfiles AP endonucleases family 1 profile. 37 350 IPR004808 GO:0004518|GO:0006281
Car05g01659 361 PANTHER AP ENDONUCLEASE 27 352 IPR004808 GO:0004518|GO:0006281
Car05g01659 361 SUPERFAMILY DNase I-like 37 348 IPR036691 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01659 - - gmx:100817167 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01659 05 61430592 61448348 Car05g01659 05 61430592 61448348 ECH