Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01653 ATGGGGAAGAAAACGAAGAAAGCTGGGAAAGGCAAAGAGAAAACAGAGAGAAAAACCGCAAAAGCCGATGAGAAACGAGCTCGCAGGGAGACTAAAAAGATTTCCCCCGAGGACGACATCGACGCCATTTTGTTGAATATTCAAAAGGAAGAAGCTAAAAAGAAGGAAGTTCATATTGAAGACAATGTTCCCGCGCCTTCTCCTCGCTCCAATTGCACGCTCACTGTTAATCCTTTGAAAGAGACGGAGTTGGTTCTCTATGGAGGTGAATTCTACAATGGGAACAAGACTTTTGTCTATGGTGATCTTTACCGGTATGATGTTGAGAAGCTGGAATGGAAACTGATTTCAAGTCCTAATAGCCCTCCTCCTCGCAGTGCTCATCAGGCTGTTGCTTGGAAGAATTTTGTTTATATTTTTGGTGGTGAATTTACATCTCCAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTTGTGTAAGGAAAATGTGGATTTTTGGATGTTGGACCTGAAAACTAATCAGTGGGAACAGCTCAATTTAAAAGGGTGCCCCGGTCCACGCTCAGGACATCGGATGGTATTATACAAGCACAAGATTATTCTTTTTGGTGGCTTTTATGATACACTTAGAGAAGTGAGGTTGTACTACAATGATCTATTTGTATTTGACCTTGATCAATTTAAGTGGCAAGAAATAAAGCCTAAGCCTGGAGCAATGTGGCCAACTGGGCGTAGCGGTTTTCAATTATTTGTTTACCAAGATGATATTTTCTTATATGGTGGCTATTCAAAAGAAGTTTCATCGGACAAGAATGCCTCTGAGAAAGGAATTGTTCATTCAGATATGTGGTCCCTTGATCCTAAGACTTGGGAATGGAACAAGGTTGTTAAGAAAAGTGGGATGCCTCCTGGTCCTCGTGCAGGGTTTTCCATGTGTGTTCATAAGAGGAGGGCTCTGCTATTTGGTGGTGTTGTGGATATAGAAGTTCAAGGTGATGCAATTATGAGCTTGTTCTTGAATGAGCTTTATGGCTTTCAGTTAGACACCAATCGCTGGTATCCTCTGGAGTTAAGAAAGGATAAATCGACAAAAGATAAGTTAAGAAAAACTGAACAAAATTGTACTAGTGATGTCAACAAGAAGGTAGAACCACTATTTACTGCAAGAGATGAAACTGAGGATTCAGAGTACGAAGAAAGCTGCAATGATGATATATCCCAGAATATTGCATCAAAGATGACTATTGATGACAGTGAAACACTTACCAAATCTGAAGGAATGTCTAAGGAATCTGGTGCTAAATTGGACATTCAGAATTCTTTGCCTGAGGCAGTGAAACCCTGTGGGCGTATTAATTCCTGCATGGCTGTTGGAAGAGATACATTATATATATATGGTGGCATGATGGAGATTAAAGATCAAGAAATCACTCTTGACGACTTGTATTCTCTGAACCTTAGCAAACTTGATGAATGGAAGTGCATCATACCGGCATCAGAATCTGAATGGGTGGAAGTTTCAgaggatgatgatgatgaagaagaaaatgatgatgatgaggaagacgacgacgatgaATCTAATAGCGATGGTACAAGTgaggagaacgaagatgatgaggaggaggagGTTCAGAATGCATCAGTTCAGGTGGGAGATGCTGTTGCTCTAATCAAGGGAGGAGTAAAGAATATGCGTAGGAAAGAAAGAAGGTCACGGATAGAGCAGATCAGAGCTAGCCTTGGCTTGTCAGATTCACAGAGAACACCATTGCCAGGAGAATCGTTGAGGGATTTCTATAGACGTACAAATTTGTATTGGCAAATGGCAGCCCATGAACATACTCAGCACACTGGAAAGGAACTCCGCAAGGATGGTTTTGATCTTGCGGAAGCTCGATACAGGGAGCTAAAACCTATTCTTGACGAGCTGGCTTTATTAGAAGCTGAGCAGAAAGCTGAAGAGGCTGAGGGGCCTGAAACTAGTGCAAATAAAAGAGGCAAGAAGAAAACTAGAAATTGA 2211 0.3573 MGKKTKKAGKGKEKTERKTAKADEKRARRETKKISPEDDIDAILLNIQKEEAKKKEVHIEDNVPAPSPRSNCTLTVNPLKETELVLYGGEFYNGNKTFVYGDLYRYDVEKLEWKLISSPNSPPPRSAHQAVAWKNFVYIFGGEFTSPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLCKENVDFWMLDLKTNQWEQLNLKGCPGPRSGHRMVLYKHKIILFGGFYDTLREVRLYYNDLFVFDLDQFKWQEIKPKPGAMWPTGRSGFQLFVYQDDIFLYGGYSKEVSSDKNASEKGIVHSDMWSLDPKTWEWNKVVKKSGMPPGPRAGFSMCVHKRRALLFGGVVDIEVQGDAIMSLFLNELYGFQLDTNRWYPLELRKDKSTKDKLRKTEQNCTSDVNKKVEPLFTARDETEDSEYEESCNDDISQNIASKMTIDDSETLTKSEGMSKESGAKLDIQNSLPEAVKPCGRINSCMAVGRDTLYIYGGMMEIKDQEITLDDLYSLNLSKLDEWKCIIPASESEWVEVSEDDDDEEENDDDEEDDDDESNSDGTSEENEDDEEEEVQNASVQVGDAVALIKGGVKNMRRKERRSRIEQIRASLGLSDSQRTPLPGESLRDFYRRTNLYWQMAAHEHTQHTGKELRKDGFDLAEARYRELKPILDELALLEAEQKAEEAEGPETSANKRGKKKTRN 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01653 736 SUPERFAMILY Kelch motif 64 144 IPR015915 GO:0005515
Car05g01653 736 MobiDBLite consensus disorder prediction 1 35 - -
Car05g01653 736 SUPERFAMILY Kelch motif 227 557 IPR015915 GO:0005515
Car05g01653 736 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 729 - -
Car05g01653 736 MobiDBLite consensus disorder prediction 711 736 - -
Car05g01653 736 MobiDBLite consensus disorder prediction 563 613 - -
Car05g01653 736 MobiDBLite consensus disorder prediction 711 729 - -
Car05g01653 736 Pfam Domain of unknown function (DUF4110) 645 730 IPR025183 -
Car05g01653 736 MobiDBLite consensus disorder prediction 12 35 - -
Car05g01653 736 Pfam Galactose oxidase, central domain 68 122 - -
Car05g01653 736 Pfam Galactose oxidase, central domain 517 560 - -
Car05g01653 736 Pfam Kelch motif 249 298 IPR006652 GO:0005515
Car05g01653 736 Gene3D - 222 436 IPR015915 GO:0005515
Car05g01653 736 MobiDBLite consensus disorder prediction 566 609 - -
Car05g01653 736 Gene3D - 14 152 IPR015915 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01653 224 386 Acyl Lipid Metabolism Gene Families AT3G05420 27.879 2.53e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01653 - - mtr:MTR_1g107265 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01653 05 61292506 61302253 Car05g01653 05 61292506 61302253 ECH