Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01652 ATGTTAAAATCAACATTCACACCCATTTACTTGGTCCTATCCCCCAAACCAAAATCACCAAAACTATCATCTCACATAATCACCAACACATTCTCAAACAGCACACAACCTGTTCGACAAAACTCCTCTCTCAAACACACCCCTTCTTCAGCTTATGTTCACCTCCCTTTTTGTCGAAAACGTTGCCACTACTGTGACTTCCCTATCGTCGCTCTCGGCTCCGCTTCAACCCAAACACAAAACGACCCACGTGTCTCAAACTACATACAATGGCTCTGCAGAGAAATCAACGCAACCAAAATCGACGAAGAAAATACAAACACGCCCCTTCAAACTGTCTTCTTTGGAGGTGGGACACCCTCTCTCGTTCCTCCAACCATGGTTTCCTCAGTTTTGGAGACTCTGAGGAACAAATTTGGGTTGAGTCAAAGTGCTGAAATTTCAATGGAAATGGACCCTGGCACGTTTGATTATAAGAAGATGCAAGAGATGATGTTGTTGGGAGTGAACAGAGTTTCTTTGGGTGTTCAAGCGTTTCAAGAGAAGCTTTTGAGGAGTTGTGGGAGAGCACATGGTTTGAAAGAGGTTCATGAAGCTATTGATATTGTTAAGTCATGTGGGGTTGAGAATTGGAGTATAGATCTTATAGCTTCATTGCCTCATCAGACTAGTGACATGTGGGAGGAAAGTTTAAGGCTTGCCATTGAAGCACAACCAACTCATGTTTCTGTTTATGATTTGCAAATTGAACAAGGCACTAAATTTGGAAGGATGTATGCACCGGGGGAATTTCCACTGCCTTGTGAGACACAATCAGCTGAATTCTATAAGATGGCCTCAAGAATGCTTGGTGATGCAAATTATAACCATTACGAAATCAGCAGCTACTGTAAGAGTGGTTATGAGTGCAGACACAACTATACCTATTGGAAGAACAAGCCTTTCTATGCCTTTGGCCTTGGCTCTACTAGTTTTGTTGGTGGGTTGAGATTTTCAAGACCAAAGATGGTGAATGAGTACATGAATTTCGTGCAAAATCTCGAAAATGGATCAGTAAATAGCTCATCTGATAACGACATTCATGGCAAGGACACAGCGATGGATGTTGTGATGCTGTCCCTAAGAACAGCAAGAGGCCTAGACTTGAAACGTTTCGGGGAATCATTTGGCAGCTCTTTGGTTTTGTCTCTGCTTGAGGCTTATAAACCTTATGTTGAGAGTGAACACGTGGTTTTCTTGGACGAGCAAAGGATAACCATTGGAATAGATGATGTAAAAAATGCTCATTTGGATGAAACTAACTCAGAAAGGAGAGTTGCCTATATAAGGCTAAGTGACCCAAATGGTTTCCTTTTATCAAATGAGTTAATAGCTCTTGCTTTTGGGGTTATTGACTCTTGA 1401 0.4183 MLKSTFTPIYLVLSPKPKSPKLSSHIITNTFSNSTQPVRQNSSLKHTPSSAYVHLPFCRKRCHYCDFPIVALGSASTQTQNDPRVSNYIQWLCREINATKIDEENTNTPLQTVFFGGGTPSLVPPTMVSSVLETLRNKFGLSQSAEISMEMDPGTFDYKKMQEMMLLGVNRVSLGVQAFQEKLLRSCGRAHGLKEVHEAIDIVKSCGVENWSIDLIASLPHQTSDMWEESLRLAIEAQPTHVSVYDLQIEQGTKFGRMYAPGEFPLPCETQSAEFYKMASRMLGDANYNHYEISSYCKSGYECRHNYTYWKNKPFYAFGLGSTSFVGGLRFSRPKMVNEYMNFVQNLENGSVNSSSDNDIHGKDTAMDVVMLSLRTARGLDLKRFGESFGSSLVLSLLEAYKPYVESEHVVFLDEQRITIGIDDVKNAHLDETNSERRVAYIRLSDPNGFLLSNELIALAFGVIDS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01652 466 SFLD HemN-like, clustered with heat shock genes 46 419 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Car05g01652 466 SUPERFAMILY Radical SAM enzymes 45 411 - -
Car05g01652 466 ProSiteProfiles Radical SAM core domain profile. 43 286 IPR007197 GO:0003824|GO:0051536
Car05g01652 466 PANTHER COPROPORPHYRINIGEN III OXIDASE 36 463 IPR034505 -
Car05g01652 466 Pfam Radical SAM superfamily 53 233 IPR007197 GO:0003824|GO:0051536
Car05g01652 466 PANTHER RADICAL S-ADENOSYL METHIONINE DOMAIN-CONTAINING PROTEIN 1, MITOCHONDRIAL 36 463 - -
Car05g01652 466 TIGRFAM hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 50 404 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Car05g01652 466 SMART MiaB 48 278 IPR006638 GO:0003824|GO:0051536
Car05g01652 466 Gene3D tm_1862 like domain 56 274 IPR023404 -
Car05g01652 466 SFLD Radical SAM 46 419 IPR007197 GO:0003824|GO:0051536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01652 - K07739 gmx:100779022 741.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01652 05 61289464 61291767 Car05g01652 05 61289464 61291767 ECH