Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01646 ATGCCTAGACCTCTTCCTGTTTTGATGGATGGGATTACATTACCATGGTTGCAATGGGAGACAAACAATAGCCCTTCTTCTCCTATGACAAACCTGAATAAGACACTTTTGACATCGACTCCGAATAGTGCAACTGCAAGTTCCACTCAGGAAAAATTTAAAGATCAAAGTAACCATTCTATCAGCAGTAGTAGAAGTTGGAGTCCTGATTACCTTCAGGAGTATGTCGGAAAGGATTACGAACTGCCGTTCTATTATCCTGGCCAAATTTGTGTGGGAAAGGTGACAACTTTGCATCTTTACCAAGGGGCATTTGTTGACATTGGAGGTGTATATGATGGGTGGGTTCCAATAAAGAATAATGATTGGTTTTGGATTCGTCATCATATAAGAGTGGGTATGCAAGTCATTGTTGAAATTACGGCAAAGCGGGATCCTTATCGCTTCCGGTTCCCAATCGAACTGCGTTTTGTCGATCCAAATATAGATCATCTGATCTTTAACAGATTTGACTGCCCACCAATATTTCACCGCGAGGAAGATACAAATCCAGATGAATTGCGGCGTGACTGTGGAAGACCTCCCATTCCTAGAAAAGATCCAGGAGACAAGCCAGCAGAAGAACCTTTATTTTCCAATCACCCATATGTTGATAAGAGTGACTTGGATCGTTCTCAAAATTCTAAAAGTCGGGCAAATCTAATAAATAATGATATTGGGAACAAGCTAATGCACAATCCAGCTGCTTTGGATCAAAGACAAGTGTTGAGAAAGTCCCTTAATCACAAGGATTTGAGATCATATGATGGCTACTCTAGTCATTCTTCAGTTCTAACTGACGATGAAGGAGCAGGTGCTTACTTAAAAAAAAGTGGAAGTGAGAAACTGCGAGCAGTTCATGTGCAGAAGAAGGTTGGACTCACTGACATGGCTAATGGATTGCACAAAGCAGTGCGGAAAGAATTGAGGCAAATGGAAACGGATCTAGCGGCGGTGAAATCAAGGGCCTCCACTTTATCCCCACCAATATTTCACCGCGAGGAAGATACAAATCCAGATGAATTGCGGTTGATTTGTACAACAATTATCAAGTTGTTTGAAATGCCTAGACCTCTTCCTGTTTTGATGGATGGGATTACATTACCATGGTTGCAATGGGAGACAAACAATAGCCCTTCTTCTCCTATGACAAACCTGAATAAGACACTTTTGACATCGACTCCGAATAGTGCAACTGCAAGTTCCACTCAGGAAAAATTTAAAGATCAAAGTAACCATTCTATCAGCAGTAGTGGAAGTTGGAGTCCTGATTACCTTCAGGAGTATGTCGGAAAGGATGTATTTAGTAAACTTGGAAAAGTTTATAGTAATCAAGATCAGTCATTATTAGCTAAACCAAAAGGATTGAAATATGATATAGATGAGTATCTAAAAGTTAAAAGCAGTGAAGATTTTCTGACTAAGAGATGGAAGCAATAA 1479 0.4016 MPRPLPVLMDGITLPWLQWETNNSPSSPMTNLNKTLLTSTPNSATASSTQEKFKDQSNHSISSSRSWSPDYLQEYVGKDYELPFYYPGQICVGKVTTLHLYQGAFVDIGGVYDGWVPIKNNDWFWIRHHIRVGMQVIVEITAKRDPYRFRFPIELRFVDPNIDHLIFNRFDCPPIFHREEDTNPDELRRDCGRPPIPRKDPGDKPAEEPLFSNHPYVDKSDLDRSQNSKSRANLINNDIGNKLMHNPAALDQRQVLRKSLNHKDLRSYDGYSSHSSVLTDDEGAGAYLKKSGSEKLRAVHVQKKVGLTDMANGLHKAVRKELRQMETDLAAVKSRASTLSPPIFHREEDTNPDELRLICTTIIKLFEMPRPLPVLMDGITLPWLQWETNNSPSSPMTNLNKTLLTSTPNSATASSTQEKFKDQSNHSISSSGSWSPDYLQEYVGKDVFSKLGKVYSNQDQSLLAKPKGLKYDIDEYLKVKSSEDFLTKRWKQ 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01646 492 MobiDBLite consensus disorder prediction 181 228 - -
Car05g01646 492 MobiDBLite consensus disorder prediction 181 207 - -
Car05g01646 492 MobiDBLite consensus disorder prediction 27 66 - -
Car05g01646 492 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10 75 219 IPR044967 GO:0000427|GO:0003723
Car05g01646 492 SUPERFAMILY Nucleic acid-binding proteins 84 143 IPR012340 -
Car05g01646 492 Coils Coil 315 335 - -
Car05g01646 492 MobiDBLite consensus disorder prediction 394 433 - -
Car05g01646 492 ProSiteProfiles S1 domain profile. 88 156 IPR003029 GO:0003676
Car05g01646 492 Gene3D - 85 156 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01646 Car-Chr5 61220591 61232702 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01646 - - cam:101506863 312.383