Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01643 ATGCAAGTCTTCAACAACTCTTATCTCTTCACTTTTCCTAAACCTCCCTTAAACCCTCTCTCTCCCCTTTTCCACCATCACCGTCGTTCTCTTCCCTTAATCCTCCGCAAACTGCCACTCACCACCGTCGCCAAATCCTTTAGCTCCGATGAGTTCCCCGTTGACGAGACCTTCGTCCAAACCTTCGGTCCCAAAAGCAAGGAAACCGAAGAGGAAGCTCGAAGACGCAACTGGATCGAACGAGGCTGGGCTCCGTGGGAAGAAATCCTCACTCCCGAAGCCGATTTCGCGCGCAAGAGTCTGAACGAAGGCGAAGAAGTTCCTCTAAGTTCACCGGAAGCCATAGAAGCTTTCAAAATGCTGAACCCTAGGTACCGTAAGAAGAAGATGGAGGAGATGGGATTGACGGAAGAGGAGTACCTTGCTAAGCAGTTTGAGATAAAGGGAGAGATTCCGGAGCCGTTGGAGACTAAGTGGGCGGGACCGCTGGTGGTGCGGTTAGTTCCGCCGCGCGATTGGCCTCCGCGAGGGTGGGAGGTTGATCGGAAAGAACTTGCGTTTATTCGAGAAGCGCATAAGTTGCAGGCGAAGAGGGTGAGGTTGGAGGATATAGAAAATGGAGTTAGAACTGAAACAGATGATGTGTGCTTAGATAGGTATAAGGTGTTTCTGAAACAGTACAAGGAGTGGGTGGACGCTAACAAGGATTTATTGGAAGAGGAATCTTATAAGATAGATCAAGATTATTACCCTGGTAGGAGGAAAAGAGGCAAGGACTACAAGGAAGGCATGTACGAACTGCCGTTCTATTATCCTGGCCAAATTTGTGTGGGAAAGGTGACAACTTTGCATCTTTACCAAGGGGCATTTGTTGACATTGGCGGTGTATATGATGGGTGGGTTCCAATAAAGAATAATGATTGGTTTTGGATTCGTCATCATATAAGAGTGGGTATGCAAGTCATTGTTGAAATTACGGCAAAGCGGGATCCTTATCGCTTCCGGTTCCCAATCGAACTGCGTTTTGTCGATCCAAATATAGATCATCTGATCTTTAACAGATTTGACTGCCCACCAATATTTCACCGCGAGGAAGATACAAATCCAGATGAATTGCGGCGTGACTGTGGAAGACCTCCCATTCCTAGAAAAGATCCAGGAGACAAGCCAGCAGAAGAACCTTTATTTTCCAATCACCCATATGTTGATAAGTTGTGGCAGATTAATGTAGCTGAGCAAATGATTTTGACTGATATGGATGTTAATCCTGATAAATATAAAGGCAAAAAGCTGTCAGACTTGGTTGACGAAGATGATTTTGATGAAGAAAAATCAGTTCAGCATACAAAAGTTCAGTATAAGAATGCATTACTGCCAAAAGTAACTCTGAAAACAAGTGTCAAAGAGCTTGACTTAGAGGCTGCACTTGCTGAGCGTGAGCTCCATAAGAAACTATGGAATGAAGCAAAGGACAGAGGTGAGGAATATGAAATTACCACATTGAGGCGCAATATTGAGATGGATGAATATGATTTCATGCATTGGCGTAGATCATTTGAAGAAAGAGAAGCATTGCTTAGAGACATCAGCTGTCGCAAAACACTTGGTCTGCCGTTGGAAGAGCCAGGCAGGTATGTTGATGCTAGTTTTTTTGGTAAAGACCAGTATGATCCTACAAGTCCTCTGTATCGATATGACTATTGGGGGGAACCCAAGAATTCAGAAAAGAGCAGGAAAGAGCGGGTGACAGATACCCATAACAAATCCATTGTGGGCAAAGGCACTGTTTGGTGTGAAATGCCGTATGAAGATTGCGCCAAACAACAGCCTGCGGGGCTACGGGACAAAGAAGTCgacgatgaaggtgttgaagaagaggatgatgatgatgatgacgacgacgactttgacTTCAGCATTCTGAGCAATCTTGGTAATAATATATCGGATCAACTTCATGTTAACGGGACCGAGTCATCTAGAATATCAGATGAAGGCGTGTTTGGGGATTAA 2013 0.4367 MQVFNNSYLFTFPKPPLNPLSPLFHHHRRSLPLILRKLPLTTVAKSFSSDEFPVDETFVQTFGPKSKETEEEARRRNWIERGWAPWEEILTPEADFARKSLNEGEEVPLSSPEAIEAFKMLNPRYRKKKMEEMGLTEEEYLAKQFEIKGEIPEPLETKWAGPLVVRLVPPRDWPPRGWEVDRKELAFIREAHKLQAKRVRLEDIENGVRTETDDVCLDRYKVFLKQYKEWVDANKDLLEEESYKIDQDYYPGRRKRGKDYKEGMYELPFYYPGQICVGKVTTLHLYQGAFVDIGGVYDGWVPIKNNDWFWIRHHIRVGMQVIVEITAKRDPYRFRFPIELRFVDPNIDHLIFNRFDCPPIFHREEDTNPDELRRDCGRPPIPRKDPGDKPAEEPLFSNHPYVDKLWQINVAEQMILTDMDVNPDKYKGKKLSDLVDEDDFDEEKSVQHTKVQYKNALLPKVTLKTSVKELDLEAALAERELHKKLWNEAKDRGEEYEITTLRRNIEMDEYDFMHWRRSFEEREALLRDISCRKTLGLPLEEPGRYVDASFFGKDQYDPTSPLYRYDYWGEPKNSEKSRKERVTDTHNKSIVGKGTVWCEMPYEDCAKQQPAGLRDKEVDDEGVEEEDDDDDDDDDFDFSILSNLGNNISDQLHVNGTESSRISDEGVFGD 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01643 670 MobiDBLite consensus disorder prediction 366 392 - -
Car05g01643 670 ProSiteProfiles S1 domain profile. 273 341 IPR003029 GO:0003676
Car05g01643 670 MobiDBLite consensus disorder prediction 608 670 - -
Car05g01643 670 MobiDBLite consensus disorder prediction 640 662 - -
Car05g01643 670 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10 39 656 IPR044967 GO:0000427|GO:0003723
Car05g01643 670 SUPERFAMILY Nucleic acid-binding proteins 269 328 IPR012340 -
Car05g01643 670 MobiDBLite consensus disorder prediction 366 396 - -
Car05g01643 670 MobiDBLite consensus disorder prediction 619 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01643 Car-Chr5 61179850 61193443 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01643 - - gmx:100783002 1106.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01643 05 61179850 61193443 Car05g01643 05 61179850 61193443 ECH