Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01642 ATGGCGCCAACTGTACCCATAGATTTTGCTGGACAAAAGGAATCTAGAAAGTGCTCTCATTCACAAATCATGGGGAAATCTCGAAAATATTCCAAAGGTTATTCTTCTGGCTTTGTTCCCGAATACCGTCATGTTGTAGAGACTATGGGTGAATCAGATGGGTTGGGTAGTTCGGGAAGGGTTGACATGGAGCCGACGGCATCAGCTGACTCCTATGCACCAAAGAGAAAAGGCCCTGGTTTGAAAGGTGATGGTTATGGTAGTTTTGATGTACCGTTTCAACTCTTCTCATTATCTAAAATGTCTGCTATGGAGAGAAAGGATTTGAAATTGAGGTTAACTTGGGAACTTGAACAAGTAAGAAAACTTCAGAAGAAAATTGACAGTATGAATTCAAACACTGTTGGATTATCTCCCTCTAGTGACATAAGGAGCTGCAGTGTGGGACAGAAAAGGCCGCATCTGGAGAGCCAACACAGTATACTTCAAGCATCAGTTCCACATGGTAAGAAACGACCCTCACAAGGGCGTAATGGTCCCAAGACCAAAAAAAGTACGCCTGGGCGTTTGGACTATCTGAAACCTGCTGCATCAATGGCTTCATATGCTACATTGATGAAACAGTGTGAAACATTACTCAACCGTTTAATGACTCATCAATTTGGCTGGGTTTTTAGTGAACCAGTTGACGCTGTTAAGTTGAACATTCCTGATTACTTCACTGTCATCAAACATCCAATGGATTTGGGTACTGTGAGGGATAGACTAACATCTGGTAAATATTCAAATCCTATGGATTTTGCCGCCGATGTGAGGCTGACTTTCTCAAACGCAATGACTTATAATCCACCTGGCAATGATGTACACACCATCACAGAGACCCTTAGCAAAGCCTTTGAAACAAGATGGAAGGCCATAGAGAAGAAAATTCCTGTCACTGATCATCGTGTCCCATATGAGCCTTCAAAACCTACTTTTGTAGAAACTGAAATTTTGGACCCAATTCCCCCCACAAAAAAGAAGAAAGTAACGCCAAATGTTACTAATACCAAGCCACAACCCATCGAAAGAATTATGAGTGACATGGAGAAACAGAAATTGAGTCAAGAGTTGGAGGACATGCTTGGAGAGTTGCCTGAAACCATTCTTGATTTCTTGAAAGAGCAAAGTCACAATGCAGGGCAAACAAAtgatgatgaaattgagattgatatcgatactcttagtgatGATACCTTATTCAAACTGCGGAAGCTTCTTGATGATTATATGCTGGAGATGGAGAAGCAAAGATTCCATCCAAAAGCGGGACAGTGTGAAATGGAGATTCCTAATGAATCAGGGTTTAGCAACTCATCAATGCAACCATCTAAAGGCAATGAACTGGTTGACGAGGATGTGGACATTGTTGGTGGGAATGATCCTCCTATTTCAAATTATCCTCCACTAGAGATTGAGAAAGATGGAACCAACAGAAACAGTAAATGCAGTAGTTCAAGCAGCTCTAGTAGTGAATCTGGCTCATCATCAAGTGATTCAGATTCAAGTAGTTCATCTGGTAGTGAGTTAGATACTGCTAAGGCGTCGGAACCTCTTAGTACTAAGAAGGAAAATGTAGGACCTGGCTTGACTTGTGATCAAAACAGGGGGGATCTTAGTAATCCAGAAGCTGGAAAGGATTCAACTGATCTGGGTACCCAGGTTGACCAGAGTTTGGAGACTAAGGCAGTTACAATTGAATCAGAAAGCCATCAAGATGGGGAGAGTGCTGCGTCTAAGAGGCAAGTCTCTCCTGAAAAGCTCTACCGTGCAGCTTTATTAAGGAGCCGGTTTGCTGACACCATATTGAAAGCTCAAGAGAAAGCCCTTGAAAAGGATGAAAAGCGTGACCCTGAAAAGCTTAGAATAGAGCGAGAAGGACTTGAAAGGAGGCAGAAAGAAGAGAAAGCTCGACTGCAGGCAGAGGCAAAGGCTGCAGAAGAGGCTCGGAGGAAAGCTGAAGCAGAAGCTGCAGCAGAAACCAAAAGGAAGAGGGAAGAGGAGAGAGAAGCAGCCCGCCAGGCTTTGCAAAAGATGGAGAAAACTGTTGAGATCAATGAGAGCTGTCAATTTTTGGAAGATCTAGAGATGCTGAGTGCTGTACATGATGAGAATGCACCAATTTTCAAGGAGGCGAGCCCTGATCACCATCAAAATGGATTTGGTGGGATCAAGCTGCAGGGTAATCCCTTAGAGCAGCTAGGATTGTATatgaaggttgacgatgaggatgaggaggaagaACTGCCTCAAAGTGCTGCAGGGCCATCGAAAGATGTAGAAGAAGGAGAAATTGATTGA 2340 0.4201 MAPTVPIDFAGQKESRKCSHSQIMGKSRKYSKGYSSGFVPEYRHVVETMGESDGLGSSGRVDMEPTASADSYAPKRKGPGLKGDGYGSFDVPFQLFSLSKMSAMERKDLKLRLTWELEQVRKLQKKIDSMNSNTVGLSPSSDIRSCSVGQKRPHLESQHSILQASVPHGKKRPSQGRNGPKTKKSTPGRLDYLKPAASMASYATLMKQCETLLNRLMTHQFGWVFSEPVDAVKLNIPDYFTVIKHPMDLGTVRDRLTSGKYSNPMDFAADVRLTFSNAMTYNPPGNDVHTITETLSKAFETRWKAIEKKIPVTDHRVPYEPSKPTFVETEILDPIPPTKKKKVTPNVTNTKPQPIERIMSDMEKQKLSQELEDMLGELPETILDFLKEQSHNAGQTNDDEIEIDIDTLSDDTLFKLRKLLDDYMLEMEKQRFHPKAGQCEMEIPNESGFSNSSMQPSKGNELVDEDVDIVGGNDPPISNYPPLEIEKDGTNRNSKCSSSSSSSSESGSSSSDSDSSSSSGSELDTAKASEPLSTKKENVGPGLTCDQNRGDLSNPEAGKDSTDLGTQVDQSLETKAVTIESESHQDGESAASKRQVSPEKLYRAALLRSRFADTILKAQEKALEKDEKRDPEKLRIEREGLERRQKEEKARLQAEAKAAEEARRKAEAEAAAETKRKREEEREAARQALQKMEKTVEINESCQFLEDLEMLSAVHDENAPIFKEASPDHHQNGFGGIKLQGNPLEQLGLYMKVDDEDEEEELPQSAAGPSKDVEEGEID 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01642 779 SUPERFAMILY Bromodomain 187 311 IPR036427 GO:0005515
Car05g01642 779 MobiDBLite consensus disorder prediction 444 459 - -
Car05g01642 779 MobiDBLite consensus disorder prediction 435 599 - -
Car05g01642 779 Pfam Bromodomain extra-terminal - transcription regulation 359 421 IPR027353 -
Car05g01642 779 Pfam Bromodomain 209 290 IPR001487 GO:0005515
Car05g01642 779 PANTHER TRANSCRIPTION FACTOR GTE8 25 768 - -
Car05g01642 779 MobiDBLite consensus disorder prediction 131 164 - -
Car05g01642 779 ProSiteProfiles Bromodomain profile. 217 289 IPR001487 GO:0005515
Car05g01642 779 SMART bromo_6 198 308 IPR001487 GO:0005515
Car05g01642 779 PANTHER TRANSCRIPTION FACTOR GTE10 25 768 - -
Car05g01642 779 MobiDBLite consensus disorder prediction 1 24 - -
Car05g01642 779 Coils Coil 638 695 - -
Car05g01642 779 Gene3D - 355 430 IPR038336 -
Car05g01642 779 MobiDBLite consensus disorder prediction 50 79 - -
Car05g01642 779 ProSiteProfiles NET domain profile. 349 431 IPR027353 -
Car05g01642 779 MobiDBLite consensus disorder prediction 131 190 - -
Car05g01642 779 MobiDBLite consensus disorder prediction 750 779 - -
Car05g01642 779 MobiDBLite consensus disorder prediction 492 528 - -
Car05g01642 779 Gene3D - 193 317 IPR036427 GO:0005515
Car05g01642 779 PRINTS Bromodomain signature 220 233 IPR001487 GO:0005515
Car05g01642 779 PRINTS Bromodomain signature 236 252 IPR001487 GO:0005515
Car05g01642 779 PRINTS Bromodomain signature 252 270 IPR001487 GO:0005515
Car05g01642 779 PRINTS Bromodomain signature 270 289 IPR001487 GO:0005515
Car05g01642 779 MobiDBLite consensus disorder prediction 621 688 - -
Car05g01642 779 MobiDBLite consensus disorder prediction 547 578 - -
Car05g01642 779 CDD Bromo_plant1 205 303 IPR037377 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01642 Car-Chr5 61173184 61178836 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01642 - - gmx:100776368 1038.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01642 05 61173184 61178836 Car05g01642 05 61173184 61178836 ECH