Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01628 ATGGCTCCGCATGATCTCCGCCGTCCATTCAAACGACCGTTAATCTCCGATCAAGAGAGGCGCAGACAACAATCTCTACTCCGACAGGCACAGAATCGCCTCGACGCTCAACGCCACGCTCGCTTTTTAGCATCCACCGCACTCTCTCTCCCCTCCCAAACCcccgaacctgaacctgaacctgaatccgaacctaatcacgaacGGGAATCATATGAGAAGGAACTCGACGTATTGGAAGCGTCGAAGCTGAAAGGTGCAGAAGCTCGGAAATGGTTCGCGAAACAACTCATGCTTCCCGAATGGATGATCGATATTCCCGAAACCCTCACCAATGACTGGTTCGTTTTTGCTAGGCCTTCAGGTAAACGGTGTTTTGTGGTTTCTAGTAACGGAACAACGATAAGCCGTTTGAAAAATGGTTCAATACTTCACCGTTTTCCTTCTAAATTGCCAAACGGTGCAAGGACAAAGGAAGTTTCCTCTGGTTCTTCTAACTCTTACTCTATACTTGACTGCATTTTCCACGAGCAGGATCAAACTTACTACGTTATCGATATGATTTGTTGGCGTGGCTACTCTCTCTATGATTGTACTTCTGAGTTCAGGTTCTTTTGGTTGAACTCTAAGCTTGCTGAGACTGGTGCTTGTGACCCTCCTTCCTTTTATCACAAGTATAGATTCAGTTTAGTTCCGGTATACAGTTGTGACCAGAGTGGTTTGTGTGCCGCTTATTCGGCGCCCGTGCCTTATGTCAAAGACGGTGTTCTATTCTATAGCAAGCATGCACATTACCAGGCTGGGATTACGCCATTAGCATTAGTTTGGAAGGATGAGAATTGCAGTCAATATGTTATGGACACAGACAGTAAAGGACAAGTTCCAGATCAACAACAGGTGGTGGTTTTAGAGCTTCAAGAAGATGGAAAGTTGACTACCTGTGATGATCCTTCTGTGGTATTTGGCTGTTTAGATGGAAGCTTCATCCAGCAGTCAGATTTGCATTCAGGGTATCTTCTACGGTTTGCAATTGGAGATGGAGGATTGGTTTTAGTGGATGGGAAACTTGAGAAAGCTGATCTAAAGTATCTTGGGAAGGCCAATCGAGCTCGTGCCTCTGCTGATAGTTTCTCTAAGGTTGTTATGTTCCAATATAGTGTTCGACATTCCCCCCTCAGAATTGATGATCTGCTGGGATCTGTCAGTTTACCAGTAGATCAAGAAAGTAAAGCAGACGACATTGAGATGGATGGTTGA 1257 0.436 MAPHDLRRPFKRPLISDQERRRQQSLLRQAQNRLDAQRHARFLASTALSLPSQTPEPEPEPESEPNHERESYEKELDVLEASKLKGAEARKWFAKQLMLPEWMIDIPETLTNDWFVFARPSGKRCFVVSSNGTTISRLKNGSILHRFPSKLPNGARTKEVSSGSSNSYSILDCIFHEQDQTYYVIDMICWRGYSLYDCTSEFRFFWLNSKLAETGACDPPSFYHKYRFSLVPVYSCDQSGLCAAYSAPVPYVKDGVLFYSKHAHYQAGITPLALVWKDENCSQYVMDTDSKGQVPDQQQVVVLELQEDGKLTTCDDPSVVFGCLDGSFIQQSDLHSGYLLRFAIGDGGLVLVDGKLEKADLKYLGKANRARASADSFSKVVMFQYSVRHSPLRIDDLLGSVSLPVDQESKADDIEMDG 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01628 418 Gene3D DNA ligase/mRNA capping enzyme 2 303 - -
Car05g01628 418 CDD Snurportin-1_C 92 279 - -
Car05g01628 418 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 416 IPR017336 GO:0005634|GO:0005737|GO:0061015
Car05g01628 418 MobiDBLite consensus disorder prediction 1 31 - -
Car05g01628 418 MobiDBLite consensus disorder prediction 1 26 - -
Car05g01628 418 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 92 277 - -
Car05g01628 418 Coils Coil 20 40 - -
Car05g01628 418 MobiDBLite consensus disorder prediction 45 73 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01628 K13151 - gmx:100801927 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01628 05 61056211 61059791 Car05g01628 05 61056211 61059791 ECH