Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01622 ATGTCCAGGCCATTGTACAGAGGAGTGTCTGGGATTCGGATCCCTGATAACACCCTTGATTCATGGGACTCTCAATCCAAAGATAAAACAGAAAAGGATGGTTTGGATAAAAAAGGTTCTTCTGATCCCAGCCCCTTGCCTTTGAAGTCTCCCTTTAGGTTACTTTTCGCAGATAATTCGAAAAATGGAATCACTGAGAATGGTTTCTCGCCTGATCCGTTCATTCTTGGCACTCCTAGAAGTCGGCATAAGTTGATTCTTCTTTTTATGAAGTTTAGTATAGTATTTATAGTTATACTTGCTCTTGCTGGGTCTTTTTGGTGGACAGTCTCGATTTCAACCACATCAAGAGGTCATATTTTCCATGGTTATAGAAGACTTCAAGAGAAACTTGTATCGGACCTTTTGGATATCGGGGAGATTTCTGATGCTCCGTCAAAGCTGAAAGAACTGGATTTTTGTTCTCAGGAGTTTGAAAACTATGTTCCTTGCTTTAACGTTTCCGACAATCTAGCTCAGGGTTACTCTGATGGCAATGAGTTTGATCGGCAATGTGGACGTGAGCTCAGGCAAAATTGTTTACTTCTCTCGCCGACGAATTACAAAATTCCTCTTCGGTGGCCTACTGGAAGGGATGTTATATGGGTTTCAAATGTTAAAATCACTGCACAGGAAGTTCTTTCTTCTGGAAGCTTGACCAAGAGGATGATGATGCTCGATGAAGAGCAAATTTCCTTTCGTTCTGCATCCCttatgtttgatggtgttgaagactactcacaccaaatcgcagaaatgattggaCTTCGAAATGAATCTAACTTCATACAAACAGGGGTTAGAACCATACTGGACATTGGTTGTGGCTATGGTAGCTTGGGAGCGCACCTCTTTCACAGTCAACTTTTAACTATGTGTATTGCGAACTACGAGCCTTCTGGTAGTCAAGTTCAACTTACACTTGAGAGAGGTCTTCCTGCTATGGTTGCTTCTTTCACTACAAAACAGTTGCCTTATCCATCTCTCTCCTTTGATATGCTGCATTGTGCTCGATGCGGCATAGATTGGGACCAGAAAGATGGAATTCTCTTGATTGAAGCTGATAGGCTTTTAAAACCTGGGGGCTACTTTGTCTGGAGTTCGCCGATTACATATGCTCGTAACCAAGACAGTCAGACCAGGTGGAAGTTCATACATGATTTTGCAGAAAACCTTTGCTGGGACATGCTATCGCAGCAAGATGAAACTGTTGTGTGGAAGAAAACTAGTAAACGGAAATGCTATAGTTCAAGGTCTAATGGTTCTCCTCCTCCTTTGTGTAGTAGAGGCTATGATGTGGAGTCTCCGTACTATCGAGAACTGCAAAATTGCATTGGAGGAACACATAGCAGCCGTTGGGTTTCTATTGAAGAGAGGGACAATTGGCCTTCTAGGGATCACCCGAACAAGAACGAGCTTGCAATATATGGATTGCAACCTGATGAGTTTGCCGAGGACTCTGAAAGCTGGAGGACAGCAGTACAAAATTATTGGTCTCTTCTGTCACCTTTGATATTTTCGGATCATCCAAAGAGACCCGGCGATGAAGATCCTCCACCACCTTTCAACATGCTAAGAAACGTGCTAGACATGAATGCTCATTTTGGTGGTTTTAATTCTGCATTGTTGCAATCTGGAAAGTCTGTGTGGGTCATGAATGTGGTGCCGATGAGTGGATTCAACTATCTTCCCTTGATCCAGGACCGCGGTTATGTTGGCGTTTTGCATGATTGGTGTGAGGCATTTCCAACGTACCCTAGATCGTATGACTTGGTACATGCAGCAGGGTTTTTATCCCTTGAAACTGGTCAGCAGCGCAAATGTACCTTGTTTGATATATTCATTGAAATTGATAGGTTACTTCGCCCAGAGGGTTGGATTATAATTCGTGACTCAGTTCCTTTAATAGAGATGGCTAGAGCTTTAACAACTCGGCTGAAGTGGGATGCAAGAGTTATAGAAATCGACAGTGATAGCGATCAGAGACTCCTGATCTGCCAGAAGCCTTTCTTTAAGAGACAGGCAAATTAA 2070 0.4188 MSRPLYRGVSGIRIPDNTLDSWDSQSKDKTEKDGLDKKGSSDPSPLPLKSPFRLLFADNSKNGITENGFSPDPFILGTPRSRHKLILLFMKFSIVFIVILALAGSFWWTVSISTTSRGHIFHGYRRLQEKLVSDLLDIGEISDAPSKLKELDFCSQEFENYVPCFNVSDNLAQGYSDGNEFDRQCGRELRQNCLLLSPTNYKIPLRWPTGRDVIWVSNVKITAQEVLSSGSLTKRMMMLDEEQISFRSASLMFDGVEDYSHQIAEMIGLRNESNFIQTGVRTILDIGCGYGSLGAHLFHSQLLTMCIANYEPSGSQVQLTLERGLPAMVASFTTKQLPYPSLSFDMLHCARCGIDWDQKDGILLIEADRLLKPGGYFVWSSPITYARNQDSQTRWKFIHDFAENLCWDMLSQQDETVVWKKTSKRKCYSSRSNGSPPPLCSRGYDVESPYYRELQNCIGGTHSSRWVSIEERDNWPSRDHPNKNELAIYGLQPDEFAEDSESWRTAVQNYWSLLSPLIFSDHPKRPGDEDPPPPFNMLRNVLDMNAHFGGFNSALLQSGKSVWVMNVVPMSGFNYLPLIQDRGYVGVLHDWCEAFPTYPRSYDLVHAAGFLSLETGQQRKCTLFDIFIEIDRLLRPEGWIIIRDSVPLIEMARALTTRLKWDARVIEIDSDSDQRLLICQKPFFKRQAN 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01622 689 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 15 687 - -
Car05g01622 689 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 277 422 IPR029063 -
Car05g01622 689 Gene3D Vaccinia Virus protein VP39 243 421 IPR029063 -
Car05g01622 689 MobiDBLite consensus disorder prediction 22 39 - -
Car05g01622 689 MobiDBLite consensus disorder prediction 1 48 - -
Car05g01622 689 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 539 658 IPR029063 -
Car05g01622 689 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 160 681 IPR004159 GO:0008168
Car05g01622 689 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 15 687 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01622 Car-Chr5 60950257 60953970 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01622 K23870 - gmx:100812530 1225.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01622 05 60950257 60953970 Car05g01622 05 60950257 60953970 ECH
Car02g01123 02 32153217 32157697 Car05g01622 05 60950257 60953970 PCT