Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01618 ATGGCGGCCACCTCTGAATCCATCAACGAAAACACCTTTTCTCTTCCGGTTATTGACCTCCGTCTTATCTCTCAACCCGAACTATTCACTATCTCCCTTTCTCACGATACCGCTCGTAACCGTCGCATCGACGACGATACCGTTATCCCTAAAATCGACCGTTCCGTTTTTAATGAGTCCGCCGGTAGTCGAAAACAAACGTTCTCTCGTCTCCGACTCCGTGATAACAACAAACAATACTCTTccgttcccgtaaccgttcccgttcccgctcctgtttccgttTCTTCGTCCTCTTCCTCTCACATTCCCGCCGACGAAGAGAATTCTCGAATAATCGATCTTCTTCAACAGCTATTCGGCGTTGAAGGCCTTCGTGGCGCCAATGATGATCGGCTCGTTCCGGTTCCGGTTGAATTTAAACAACCGGATATTGAATTAACGCCTCTATTTGCTCAGGAAGCTACAATCGAAGGTGTTGATGGCAGCCAGAAGAAACGGAAGCGCGGGCGGCCGCGCAGAAGCGAGACTCCGGTGCCGATGGCAAGTGTAGTCGTTGGTAAGGTTAAGGAAAATGCGGTGGAAACGGTGGAAGAAATGGCGGTGGAAAGTGTTAATAAGAAGAATGTGGAAAATTTTGAGGAGAAGAAGGGTTTTGTTTTGGATGATGTTGGAGATCCGTTTGTTGAGGAATTGATAGGGAGGACACAGGGGATGAATACGGAGCCTCAGTTGTTGGAGTTTTTGGAGGGTTTGAATGGTGTTTGGGGGAGTGATAGGAAGAAGAGGAGGATTGTTGATGCTAATGCTCTCTGTGATTTGTTGCCAACTGGTTGGAAGCTTGTGCTTACTCTTATGAGGAGGGGGACTCGTGCTTATGTGGTTTGTCGCCGTTACGTAAGCCCTGATGGACGTCCTTTTGAGTCATACAAAGACGCTTCTTTGTCCAGTGTTCAAGATGCCTCTTTGTCTAGTGTTCAAGACACTTATTTGTCCGGTGTTCAAGACATAAGCCACTTAAATGGTAGTCATCAGCTTTCCAGTAATACCAATATGGCACCTCAAAGTCAGAGTGTTGGTCACGCCCCTACAGGCGGCTTGGAGATTAATGCCCATGCAAGTTCTCATCATGAGAAGCATGCCACCATATCATCATCAATTGGAACTGAAAAGCTGGACACTTTTGATGCGAATTTCAATAGTAGCCTTGCTCTGGATTGTAAATTAGGAGATACAAGTGGAGCCATCAAAGTCTCTGACCATCAAGTGGATGATAAGCAACCACTGAAGGCGGATAAGAATGTACGTAATGCAGAGTTGGTTGGTGCTAGGGATGCTGCATGCAATCTATATATTCCTTCGGTTTTCACAGCTCCTATCTCCAATAATAGTTGTGGTATTGATAATTTTTCTGAAGGAAGTGCTGTGACATGCATAAAAGGTGGCGTTGGTATTTTTGATAGCCAGGATAAAAGTACTGGTCATGACACTGTACCCTATGGAAATGAGCGAGTACATGTTGGTGCCAATGGGATCGGGCATTCCGTCTCATTAGTGGAAGACCACATTCCGAAAATAGGTTCTGAAGGGAAAGTAGTTCTTGGTAGCAATTTAGAGGATATACATTCTATCAGCTCACTGGCGGATATTGAGAAAAATGATGGAAAGCTAGTTAAGGATGACAGTCAACAAATTGTTTCTGCTGAGGGAAATTTCTTTTATAATGATTTACCTAACTCATCCATTAATGAGAGAATGTGGGATCACAGTGAATACATTAGTAATAATTCTTTTAATGCTTGGCCACAAGATGCATCTGAGTCTTGTGGAGTTGATTTTACTCCCAATCTTTATGTAGCTAACGATGTTAGTGATAATCATGTTCTTCCAATGGATGAAGTTGCGACAAGCTGTTTACAGAAAAAGAGTAACATGAATGATCAAACTTGCACAATGGACAATATGTTGCACAGAAGTTCTGAAAGTAACATATTTACTTCAACTGGGAATCAGCACCCTTCTGCTTTTCATGATAATATGAATAACATCTCAGGCGGAACCTTTGGTCCACTCAAACATGTTGATGCTGGTTGCATGAAACCTCAGTTAGGCATTGTTTCTGGCAGTGATGTTGCAATAAATGCATATGCATCTCCTAGAGTCATGCAGGGGAAATCACAATCTGTTCCTACTGGTGGAAGTATGTTAAACCAGTTTGACAAGCCAAATGATGGTGTTAATAAAGAAAATAAATCTTGCTTATCTGAAATGGCTAAGAGTGAAAATGAAATATTCCAAACTGACTCTATGGATATGCCCAAATTCCGGTAG 2331 0.4213 MAATSESINENTFSLPVIDLRLISQPELFTISLSHDTARNRRIDDDTVIPKIDRSVFNESAGSRKQTFSRLRLRDNNKQYSSVPVTVPVPAPVSVSSSSSSHIPADEENSRIIDLLQQLFGVEGLRGANDDRLVPVPVEFKQPDIELTPLFAQEATIEGVDGSQKKRKRGRPRRSETPVPMASVVVGKVKENAVETVEEMAVESVNKKNVENFEEKKGFVLDDVGDPFVEELIGRTQGMNTEPQLLEFLEGLNGVWGSDRKKRRIVDANALCDLLPTGWKLVLTLMRRGTRAYVVCRRYVSPDGRPFESYKDASLSSVQDASLSSVQDTYLSGVQDISHLNGSHQLSSNTNMAPQSQSVGHAPTGGLEINAHASSHHEKHATISSSIGTEKLDTFDANFNSSLALDCKLGDTSGAIKVSDHQVDDKQPLKADKNVRNAELVGARDAACNLYIPSVFTAPISNNSCGIDNFSEGSAVTCIKGGVGIFDSQDKSTGHDTVPYGNERVHVGANGIGHSVSLVEDHIPKIGSEGKVVLGSNLEDIHSISSLADIEKNDGKLVKDDSQQIVSAEGNFFYNDLPNSSINERMWDHSEYISNNSFNAWPQDASESCGVDFTPNLYVANDVSDNHVLPMDEVATSCLQKKSNMNDQTCTMDNMLHRSSESNIFTSTGNQHPSAFHDNMNNISGGTFGPLKHVDAGCMKPQLGIVSGSDVAINAYASPRVMQGKSQSVPTGGSMLNQFDKPNDGVNKENKSCLSEMAKSENEIFQTDSMDMPKFR 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01618 776 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 537 761 IPR037472 -
Car05g01618 776 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 11 387 IPR037472 -
Car05g01618 776 MobiDBLite consensus disorder prediction 156 178 - -
Car05g01618 776 Pfam Methyl-CpG binding domain 270 312 IPR001739 GO:0003677
Car05g01618 776 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 537 761 - -
Car05g01618 776 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 11 387 - -
Car05g01618 776 MobiDBLite consensus disorder prediction 723 754 - -
Car05g01618 776 MobiDBLite consensus disorder prediction 723 743 - -
Car05g01618 776 SUPERFAMILY DNA-binding domain 267 313 IPR016177 GO:0003677
Car05g01618 776 MobiDBLite consensus disorder prediction 342 363 - -
Car05g01618 776 MobiDBLite consensus disorder prediction 342 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01618 Car-Chr5 60900126 60905671 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01618 - - cam:101492327 1502.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01618 05 60900126 60905671 Car05g01618 05 60900126 60905671 ECH