Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01613 ATGCCAATGCTAGAAGGGGAAATTTGCAACCAACAACTAAATCCCCATTCTCTTCCTATTTTCTTTAATCCCACTTCCTATTCTTTTTCATTCACCGGAACCGGCGGTGGATTGTTTCTCGAACCCACAATTCCGGATTCATTTGTTCGTTTCATTTCTTCAACGATTCCCGTAACTGCTTCTTCTGAATCCAATCTTCACCGGCGACGGAGAAGGGTTCCGGTTGGGTGTTTTTTGTCGGTTAGTTTGCCAAGTAGTAGTTCTACACTTCCCGTCGATCCCAAACCATACATACTGCAAAATGGCGAACACGTTTCCGACAAGGAGACAACTACCTCAGACGCTGTCGTTCGGAATAAAAAGGTTAGGTCAAGAGAACGTCATGCCGTCAATACCACTAAGCATTTATGGTCTGGTGCTATTTCTGCAATGGTTTCTAGAACTTGTGTTGCACCACTTGAAAGACTTAAGCTGGAATATATGGTTCGTGGTGAGAAGAGGAATATCATTGAGCTTATTAAAACAATTGCTACGTCTCAAGGGTTGAGAGGTTTTTGGAAAGGGAACCTTGTAAATATTCTGCGGACGGCTCCATTCAAAGCTGTTAACTTTAGTGCTTACGATACGTATAGAAAGCAACTACTTAAATTCTCTGGAAACGAGGAAACTACCAATTTTGAGAGGTTTATTGCTGGTGCTGCCGCTGGGGTTACTGCTACTATTATTTGCCTGCCACTCGACACTATTCGGACAAAGATAGTGGCACCTGGTGGAGAAGCTTTGGGTGGTGTAATTGGTGCTTTCCAATACATGATTCGAACTGAAGGCTTCTTTTCTCTATACAAGGGTTTAGTACCATCACTTATAAGCATGGCTCCCTCTAGTGCAGTTTTTTATGGTGTATACGATATGCTAAAATCAGCTTATCTGCATTCACCCGAAGGAATGAAAAGAATCCAAAATATGCATAAACATGGGCAGGAACTGAGTGCCTTTGATCAGCTTGAGTTGGGGCCGCTAAGAACACTGTTGTATGGGGCTATTGCTGGTGCGTGTGCAGAAGCTGCTACATACCCATTTGAAGTTGTGAGGAGGCAGCTTCAATTGCAAGTCCAGTCTACTAAATTAAGTTCTCTAGGAACTTTTGTCAAAATAGTGGAACAAGGAGGGGTTCCAGCCCTTTATGCAGGACTTATTCCCAGTTTATTGCAGGTACTTCCTTCAGCATCAATTAGTTACTTTGTGTATGAGTTCATGAAGATTGTTCTCAAAGTGGAGTAA 1281 0.4262 MPMLEGEICNQQLNPHSLPIFFNPTSYSFSFTGTGGGLFLEPTIPDSFVRFISSTIPVTASSESNLHRRRRRVPVGCFLSVSLPSSSSTLPVDPKPYILQNGEHVSDKETTTSDAVVRNKKVRSRERHAVNTTKHLWSGAISAMVSRTCVAPLERLKLEYMVRGEKRNIIELIKTIATSQGLRGFWKGNLVNILRTAPFKAVNFSAYDTYRKQLLKFSGNEETTNFERFIAGAAAGVTATIICLPLDTIRTKIVAPGGEALGGVIGAFQYMIRTEGFFSLYKGLVPSLISMAPSSAVFYGVYDMLKSAYLHSPEGMKRIQNMHKHGQELSAFDQLELGPLRTLLYGAIAGACAEAATYPFEVVRRQLQLQVQSTKLSSLGTFVKIVEQGGVPALYAGLIPSLLQVLPSASISYFVYEFMKIVLKVE 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01613 426 ProSiteProfiles Solute carrier (Solcar) repeat profile. 130 213 IPR018108 -
Car05g01613 426 ProSiteProfiles Solute carrier (Solcar) repeat profile. 223 308 IPR018108 -
Car05g01613 426 ProSiteProfiles Solute carrier (Solcar) repeat profile. 337 422 IPR018108 -
Car05g01613 426 PANTHER SOLUTE CARRIER FAMILY 25 30 426 - -
Car05g01613 426 SUPERFAMILY Mitochondrial carrier 129 419 IPR023395 -
Car05g01613 426 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 30 426 - -
Car05g01613 426 Pfam Mitochondrial carrier protein 130 216 IPR018108 -
Car05g01613 426 Pfam Mitochondrial carrier protein 223 310 IPR018108 -
Car05g01613 426 Pfam Mitochondrial carrier protein 337 423 IPR018108 -
Car05g01613 426 Gene3D Mitochondrial carrier domain 125 425 IPR023395 -
Car05g01613 426 PRINTS Mitochondrial carrier protein signature 135 148 IPR002067 GO:0055085
Car05g01613 426 PRINTS Mitochondrial carrier protein signature 148 162 IPR002067 GO:0055085
Car05g01613 426 PRINTS Mitochondrial carrier protein signature 188 208 IPR002067 GO:0055085
Car05g01613 426 PRINTS Mitochondrial carrier protein signature 238 256 IPR002067 GO:0055085
Car05g01613 426 PRINTS Mitochondrial carrier protein signature 281 299 IPR002067 GO:0055085
Car05g01613 426 PRINTS Mitochondrial carrier protein signature 346 368 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01613 Car-Chr5 60853181 60857108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01613 208 420 Organic Solute Cotransporters AT5G64970 20.657 1.14e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01613 - - gmx:100812227 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01613 05 60853181 60857108 Car05g01613 05 60853181 60857108 ECH