Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01603 ATGGAGGAGCGGGCCTCATTGCCGCCACCACCTCCTCCACAAGGTTATTCCGACAACGATGACAATTCAAAACCTAAATTACCTGATATTGGTCCCGGCACATATGTTGTCCAAGTTCCTAAGGACCAAATCTACCGCGTTCCACCACCGGAAAATGCTCGTATTGCGGAGCTTCATCGAAGTTCTCCGGCTAAGGAGACAAATCGGTCACATTGTTGGTGTTTTGTGTTCATCATAATCTTCCTCGTTGTTGTGATTATTATTGGAGGCCTTCTAGGTGGCCTTTTCTCCATTGTACTTACACCAAAGGACCCAAGATTTTCAATCCAACACTTTCTCTTACATAGCAAGCCCCATCCACAATACAAAATTACTTTAGAAGTCCACAATCCAAATTCAAATGTGGGAATTTTGTATAAAGAAGGAGGAGACGTATCCCTTTCTTTAAAACGACAAAAAATTGCTTCAAGTGCCTATCCAACTTTCTCTCAAGACCGTCATAATTCAACGGAATTTGAGATAACATTAAAAAGTTCAACATCTAAATTGCCTAAGGAGGTGGAAGAAAGCATGACAAATGATAAAAAAAGAGTGCATGTTACATTTTCCTTATCAATTCATGTCCAAGCAAAAATGAAATTGGGCTTGTTGCATAGTGGGTCAATGAAATACGATGTTTCGTGCCAAGTAAAGGTGGATACATTGGCACAAAGCACTCATGTAGTTTCTCAACAATGTCAAACTAAACGACATTAG 756 0.4021 MEERASLPPPPPPQGYSDNDDNSKPKLPDIGPGTYVVQVPKDQIYRVPPPENARIAELHRSSPAKETNRSHCWCFVFIIIFLVVVIIIGGLLGGLFSIVLTPKDPRFSIQHFLLHSKPHPQYKITLEVHNPNSNVGILYKEGGDVSLSLKRQKIASSAYPTFSQDRHNSTEFEITLKSSTSKLPKEVEESMTNDKKRVHVTFSLSIHVQAKMKLGLLHSGSMKYDVSCQVKVDTLAQSTHVVSQQCQTKRH 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01603 251 MobiDBLite consensus disorder prediction 1 16 - -
Car05g01603 251 MobiDBLite consensus disorder prediction 1 32 - -
Car05g01603 251 Pfam Late embryogenesis abundant protein 125 229 IPR004864 -
Car05g01603 251 Gene3D - 115 239 - -
Car05g01603 251 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 23 249 - -
Car05g01603 251 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 23 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01603 Car-Chr5 60703038 60703948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01603 32 248 EF-hand Containing Proteins AT5G21130 33.186 3.52e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01603 - - aprc:113853148 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01603 05 60703038 60703948 Car05g01603 05 60703038 60703948 ECH