Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01598 ATGGGCCTCTCACTCTCAGCAACCTTTACCTTTGTCACTATCATCTTCCTTTTCCTCACTCTCATTGCACACTCAAGTTCTTCGCCACTACCTCCATTTGCTTGCGATTGGTCAAACCCATCCACCAGATCCTACCCATTTTGTAACCCAAAACTTCCCATCACACAACGAACCAAAGACCTTGTTTCCAGACTCACATTGAACGAGAAACTCGCTCAACTCGTTAACTCAGCCCCTCCCATTCCACGACTCGGTATCCCTGCTTATGAGTGGTGGAGTGAAGCACTTCATGGCGTTGGGAATGTCGGTCGTGGGATCTTCTTCAATGGCACCATTTCATCTGCAACTAGCTTCCCTCAAGTTATACTCACCGCAGCTACTTTTGACTCTCATCTCTGGTACCGGATCGCTCAGGCAATTGGGATTGAAGCTAGAGCAATATACAATGGAGGGCAAGCAATGGGGATGACATTTTGGGCACCAAACATAAACATATTTAGGGACCCCAGATGGGGGAGAGGACAAGAGACAGCTGGTGAAGACCCTATGGTTACTTCTAACTATGCTGTTTCCTATGTTAGAGGACTTCAAGGAGATTCCTTTAAGGGTGGTGGTACATTCAGAGGACACCTTCAAGCTTCTGCTTGTTGCAAGCATTTCACTGCCTATGATTTGGACAATTGGAAGGGTGTTAATCGCTTTCACTTTGATGCTCAGGTGAGTTTGCAAGATCTGGCGGACACATATCAGCCACCATTTCATAGTTGCGTAGAGAAAGGACGAGCTAGTGGGATTATGTGTGCTTATAACCGTGTCAATGGTGTTCCAACCTGTGCTGATTTCAATCTCTTAACCAATACCGCTAGAAAACAATGGGGTTTCCGCGGGTATATTGCATCAGATTGTGGAGCTGTTGGGATCATACATGATCAGCAAGGGTATGCAAAATCACCTGAGGATGCTGTAGCCGATGTTCTCAAAGCTGGGATGGATTTGGAATGCGGAAGTTATTTAACAGATCATGCAAAATCAGCAGTGTTGCAGAAAAAATTACCTATATCCCTAATAGACCGTGCCCTTCACAATCTCTTTTCAATTAGAATAAGATTAGGCCTATTTGAAGGAAATCCAACCAAACTTCCATTTGGCATGATTGGTCCCAACCATGTCTGTTCCAAAGATCACTTATATCTTTCTCTTGAAGCTGCAAGAAACGGCATTGTGCTTTTAAAAAACACTGCTTCACTTCTTCCACTTCCAAAAACAAGTATTTCTTTAGCAGTTATAGGTCCTAATGCAAATGCTTCCCCTTTAACATTATTAGGAAACTATGCTGGCCCTCCTTGTAAATACATTACTATACTTCAAGGTTTTCAGCACTATGTTAAGAACACTGTTTTTCATCCTGGTTGTGATGGTGGACCAAAGTGTGCTTCAGCTCAAATAGACCAAGCAGTGGAAGTTGCAAAGAAAGTTGATTATGTTGTTTTGGTTATGGGATTGGATCAAAGTGTAGAGCGGGAAGAACGTGATCGCGTTCATCTTGACTTGCCAGGCAAGCAACTTGAACTCATTAACAGTGTTGCTGAAGCTTCGAAGCGGCCGATTATTTTGGTGCTTCTTTGTGGAGGCCCTGTTGATATCAGTTCAGCTAAATATGATAACAAAATTGGAAGTATTGTATGGGCTGGTTATCCGGGTGAACTTGGCGGCATTGCACTTGCTCAGGTTATCTTTGGTGATCATAACCCAGGAGGAAGACTACCAATAACTTGGTATCCAAAAGATTACATCAAAGTTCCAATGACAGACATGAGGATGCGAGCTGATCCCTCAACCGACTATCCCGGAAGAACTTACAGATTTTACAAAGGTCCTACGGTGTATGATTTCGGCCATGGACTAAGCTACACAAAATATTCCTATCAGTTTGTTTCTGTTACGCGTGACAAACTTCATTTCAATCAATCATCCACTCATTTGATGGTTGAAAATTCAGAAACAATAAGATACAAATTAGTTTCAGAATTGAGTGAAGAAACATGCCAAAGCATGTTGGTTTCAGTAACAATTGGAGTTAAAAATAATGGAAACATTGTGGGGAGACATCCTATATTGCTGTTTATGAGACCGCGAAAGCCGAGAATTGGAAGTCCTATCAAACAATTGGTTGGTTTTGAGAGTGTGTTGTTAGATGCAGGGGAAATGAGCCATGTTGGATTTGAGCTTAGTCCTTGTGAGCATCTTAGTAGAGCAAATGAAGGTGGTTTAAAGATCATAGAAGAAGGGTCTCATTTGTTGTTTGTGGGTGATGAAGAGTATCCTATAGATATCATTGTTTGA 2343 0.423 MGLSLSATFTFVTIIFLFLTLIAHSSSSPLPPFACDWSNPSTRSYPFCNPKLPITQRTKDLVSRLTLNEKLAQLVNSAPPIPRLGIPAYEWWSEALHGVGNVGRGIFFNGTISSATSFPQVILTAATFDSHLWYRIAQAIGIEARAIYNGGQAMGMTFWAPNINIFRDPRWGRGQETAGEDPMVTSNYAVSYVRGLQGDSFKGGGTFRGHLQASACCKHFTAYDLDNWKGVNRFHFDAQVSLQDLADTYQPPFHSCVEKGRASGIMCAYNRVNGVPTCADFNLLTNTARKQWGFRGYIASDCGAVGIIHDQQGYAKSPEDAVADVLKAGMDLECGSYLTDHAKSAVLQKKLPISLIDRALHNLFSIRIRLGLFEGNPTKLPFGMIGPNHVCSKDHLYLSLEAARNGIVLLKNTASLLPLPKTSISLAVIGPNANASPLTLLGNYAGPPCKYITILQGFQHYVKNTVFHPGCDGGPKCASAQIDQAVEVAKKVDYVVLVMGLDQSVEREERDRVHLDLPGKQLELINSVAEASKRPIILVLLCGGPVDISSAKYDNKIGSIVWAGYPGELGGIALAQVIFGDHNPGGRLPITWYPKDYIKVPMTDMRMRADPSTDYPGRTYRFYKGPTVYDFGHGLSYTKYSYQFVSVTRDKLHFNQSSTHLMVENSETIRYKLVSELSEETCQSMLVSVTIGVKNNGNIVGRHPILLFMRPRKPRIGSPIKQLVGFESVLLDAGEMSHVGFELSPCEHLSRANEGGLKIIEEGSHLLFVGDEEYPIDIIV 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01598 780 Pfam Glycosyl hydrolase family 3 N terminal domain 111 362 IPR001764 GO:0004553|GO:0005975
Car05g01598 780 Pfam Fibronectin type III-like domain 706 771 IPR026891 -
Car05g01598 780 PRINTS Glycosyl hydrolase family 3 signature 118 137 IPR001764 GO:0004553|GO:0005975
Car05g01598 780 PRINTS Glycosyl hydrolase family 3 signature 213 229 IPR001764 GO:0004553|GO:0005975
Car05g01598 780 PRINTS Glycosyl hydrolase family 3 signature 287 305 IPR001764 GO:0004553|GO:0005975
Car05g01598 780 PANTHER SUGAR HYDROLASE-RELATED 4 779 IPR044993 GO:0009044|GO:0045493
Car05g01598 780 PANTHER GLYCOSIDE HYDROLASE FAMILY 3 PROTEIN 4 779 - -
Car05g01598 780 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 407 640 IPR036881 GO:0004553|GO:0005975
Car05g01598 780 Gene3D Immunoglobulins 665 778 IPR013783 -
Car05g01598 780 Gene3D - 392 638 IPR036881 GO:0004553|GO:0005975
Car05g01598 780 Pfam Glycosyl hydrolase family 3 C-terminal domain 407 637 IPR002772 GO:0004553|GO:0005975
Car05g01598 780 SUPERFAMILY (Trans)glycosidases 45 405 IPR017853 -
Car05g01598 780 SMART Fn3_like_2 703 773 IPR026891 -
Car05g01598 780 Gene3D - 57 380 IPR036962 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01598 Car-Chr5 60639992 60643856 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01598 21 780 Glycoside Hydrolase AT1G78060 65.138 0.0 1029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01598 - - aprc:113867121 1381.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01598 05 60639992 60643856 Car05g01598 05 60639992 60643856 ECH