Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01597 ATGAGTGAGGAAATGAAGAAAATTGCCTCTGATGATGGCCATGAGAAAGTATTAGCACTATCATTGTCACCAGAACAGCGGGCTAAGATAATTGAGGTGAGAAAATTGATAGGAACATTATCAGATAAGGCATCTGTATATTGTTCTGATGCATCCATCTCAAGGTATTTAAAGTCACAGAATTGGAATGTCAAGAAAGCATCTCAAATGTTGAAACTGAGCTTAAAATGGAGACACGAATACAAACCTGAAGAGATCAGCTGGGACGAGGTTTCTGATGAAGCAGAGACAGGAAAAATATATAGACCAAACTATTATGACAAGCATGGGAGACCTGTACTTATAATGAGAACGAATCGCCAGAGATCGAAGTCATTAAAAGAAGAGATTAAGCATTTTGTTTACTGCATGGAGAATGCAATTTTAAATCTTCCACCTAACCAGGAAGAGGTGGTTTGGCTAGTTGATTTCCATGGTTTCAATCTGTCAAATATATCATTCAAGATGACACGTGAAGTCTCTCATATATTACAAAAATATTATCCACAGCGCCTTGGATTGGCAATAATGTATGATGCACCCAAGATTTTCCAACCATTCTTCTCGGTAACCAAACAAAATACTCTTATCCATAATATCTTTTAG 645 0.369 MSEEMKKIASDDGHEKVLALSLSPEQRAKIIEVRKLIGTLSDKASVYCSDASISRYLKSQNWNVKKASQMLKLSLKWRHEYKPEEISWDEVSDEAETGKIYRPNYYDKHGRPVLIMRTNRQRSKSLKEEIKHFVYCMENAILNLPPNQEEVVWLVDFHGFNLSNISFKMTREVSHILQKYYPQRLGLAIMYDAPKIFQPFFSVTKQNTLIHNIF 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01597 214 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 88 205 IPR001251 -
Car05g01597 214 SUPERFAMILY CRAL/TRIO domain 88 205 IPR036865 -
Car05g01597 214 SMART sec14_4 94 212 IPR001251 -
Car05g01597 214 SUPERFAMILY CRAL/TRIO N-terminal domain 21 90 IPR036273 -
Car05g01597 214 CDD SEC14 96 205 IPR001251 -
Car05g01597 214 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 1 205 - -
Car05g01597 214 Pfam CRAL/TRIO domain 97 205 IPR001251 -
Car05g01597 214 Gene3D - 3 206 IPR036865 -
Car05g01597 214 PANTHER GH16843P 1 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01597 Car-Chr5 60635354 60637809 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01597 - - cam:105852179 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01597 05 60635354 60637809 Car05g01597 05 60635354 60637809 ECH