Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01596 ATGGCAGCTGAAGTATGTCACCATGCTATTGCAACTTTGCAGTCTCATTCTTATCTTAGTAATTGGAATCAACACCAAAAGCTCAAAAGCAATTTAGGCTTTATTTGTAGTAATGGTTTGTCAAAGGGGAGAAGTAGTCACTTCGGCCGGAAGAATTGTATTGTAATTCGATCTTCAGCTTCCCATTCTCAAACTTCAGTTGTTGATCAAGTGTCATCCCCTTCAAGAAGCAATACTAGCGACACTTCCAAGAAATCAAATGAAGCGTCTTTGATCCTTATTCGACATGGTGAGTCGTTGTGGAATGAAAAGAATTTGTTCACAGGTTGTGTTGATGTCCCCCTAAGCAAGAAGGGTATAGATGAGGCAATTGAAGCTGGAAAAAGAATTAGCAGCATTCCTGTTGATCTCATATTTACATCTGCTTTGATCCGTGCACAAATGACAGCTATGCTTGCCATGACACAGCACCGCCGTAGGAAGGTGCCTATCGTTATGCACAACGAGAGTGAACAAGCAAAGGCATGGAGTCAAGTTTTTAGTGAAGATACAAAAAAACAGTCCATTCCAGTCATAGCAGCTTGGCAACTAAATGAAAGAATGTATGGGGAATTACAAGGTCTCAATAAGCAAGAAACAGCAGACAGATACGGGACAGAACAAGTCCATGAGTGGCGCCGAAGCTACGACATACCTCCTCCCAATGGTGAAAGTTTGGAAATGTGTGCTGAAAGAGCAGTTGCCTATTTCAGAGACCATATTGAACCCCAACTTTTATCTGGAAAGAATGTTATGATTGCCGCACATGGGAATTCATTGAGATCCATTATCATGTATCTCGACAAATTAACTTCCCAGGAGGTCATTAGTTTAGAACTGTCAACCGGAATTCCAATGCTTTACATTTTCAAAGAGGGAAGATTCATTAGGAGGGGGAGTCCCATAGGACCAACCGAAGCTGGAGTTTATGCCTATACCAAGCGTTTGGCTCTTTACAGGCAGAAGTTGGATGAGATGTTCTAA 1023 0.4174 MAAEVCHHAIATLQSHSYLSNWNQHQKLKSNLGFICSNGLSKGRSSHFGRKNCIVIRSSASHSQTSVVDQVSSPSRSNTSDTSKKSNEASLILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDLIFTSALIRAQMTAMLAMTQHRRRKVPIVMHNESEQAKAWSQVFSEDTKKQSIPVIAAWQLNERMYGELQGLNKQETADRYGTEQVHEWRRSYDIPPPNGESLEMCAERAVAYFRDHIEPQLLSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIGPTEAGVYAYTKRLALYRQKLDEMF 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01596 340 Pfam Histidine phosphatase superfamily (branch 1) 186 294 IPR013078 -
Car05g01596 340 Pfam Histidine phosphatase superfamily (branch 1) 91 162 IPR013078 -
Car05g01596 340 PANTHER PHOSPHOGLYCERATE MUTASE 1 339 IPR005952 GO:0004619|GO:0006096|GO:0016868
Car05g01596 340 PANTHER PHOSPHOGLYCERATE MUTASE 1, HISTIDINE PHOSPHATASE SUPERFAMILY-RELATED 1 339 - -
Car05g01596 340 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 93 102 IPR001345 GO:0003824
Car05g01596 340 SUPERFAMILY Phosphoglycerate mutase-like 91 307 IPR029033 -
Car05g01596 340 CDD HP_PGM_like 91 310 IPR013078 -
Car05g01596 340 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 88 315 IPR005952 GO:0004619|GO:0006096|GO:0016868
Car05g01596 340 Gene3D - 80 313 IPR029033 -
Car05g01596 340 MobiDBLite consensus disorder prediction 65 87 - -
Car05g01596 340 SMART PGAM_5 90 276 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01596 Car-Chr5 60631170 60635357 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01596 K01834 - gmx:100802621 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01596 05 60631170 60635357 Car05g01596 05 60631170 60635357 ECH