Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01586 ATGGGTTCGTTTTTCAGTGTTGCGAATACCAATTCTGATCAAAGTGAGGGAGATGGCGTCTCTTCAAATGAGACATGTAAGAGGCAAAGAATGACGGCTACCTTCTATGAAGAGAATCCGAGACTATTCCCTAATCTACCTGATGAGGTTTCGATTCAGATTATTGCTAGACTTCCTCGAATTTGTTACTTCAATTTAAGGTCGGTGTCGAGGAAGTGGAAGTCGGTTATCGTGAGTTCAGAATTATATAAAGTAAGGAAAGAACTAGGGACGACTGAAGAGTGGCTATATCTGTTGATTAAGGTAGGCGAAAATAAGCTTCAGTGGCACGCGGTAGATCCTCGTTCTCAGATATGGCAGAGACTGCCTACTATGCCTAATGTTGTCGATGAAGATGAATCTAGGAAGGGTTCTTCTAGGCTTTGGATGTGGAACATTGTGGAAGGTATCAGAATTGCTGAAGTTATTAGAGGCTTTCTTGGACGGAAGGATGCATTTGATGAAATGCCCTTTTGTGGTTGTGCTATTGGAGCTGTTGGTGGATGTCTCTATGTTCTAGGTGGATTCTCTAAAGCTTCGACTATGAGATGTGTCTGGCGATTTGATCCAATACAAAATACATGGAGCAAGGTGAGTTCTATGTTGACAGGTCGGGCATACTGTAAGACAGGGATCTTAAATAACAAGCTTTATGTTGTTGGAGGGGTTAGTCAAGGTCCAGCTGGATTAGTACCTCTTCAATCTGCTGAAGTTTTCGATCCGTCTACAGGTATATGGTCAGATGTTCCTAGTATGCCATTCTCGAGAGCTCAGGTCCTTCCCAATGCTTTCTTGGCCGACATGTTAAAGCCAATTGCGACGGGGTTGACATCATACAATGGAAGGTTATGTGTTCCACAAAGTTTGTATTCATGGCCCTTTTTTGTTGATGTTGGAGGAGAAATCTATGATCCTGAAACAAACTCGTGGATAGAAATGCCAATTGGAATGGGCGAGGGTTGGCCCGCACGGCAGGCGGGTACGAAATTAAGCGTCGTAGTGGATGGTGAATTATATGCTTTTGATCCTTCTAATACTATGGACAATGGAAGGATCAAGGTATATGATCAAGGGGAAGATGCTTGGAAAGTTGTTATTGGAAAAGTCCCTATATATGGTTCTGATGATTCAGAATCTCCTTATCTACTTGCTGGTTTCCATGGAAAGCTTCATGTCATCACAAAAGATGCCAATCGTAATATCGCTGTTCTGCAGGCCGAACTGCGCAATAATTTGGATTCATCGGTACCATCACCCTCAAATCCGTCGCAAAGTTCATTGCATGAACTTGTGGAGCCAGCGGCGGCGGCTGAATCAGATGCTGTTGTTTGGAAGATAGTTGCCAGTAGGTGTTTGGGACATGTTGAACTAGTTAGTTGCCAAGTAATTGATATGTAG 1437 0.4315 MGSFFSVANTNSDQSEGDGVSSNETCKRQRMTATFYEENPRLFPNLPDEVSIQIIARLPRICYFNLRSVSRKWKSVIVSSELYKVRKELGTTEEWLYLLIKVGENKLQWHAVDPRSQIWQRLPTMPNVVDEDESRKGSSRLWMWNIVEGIRIAEVIRGFLGRKDAFDEMPFCGCAIGAVGGCLYVLGGFSKASTMRCVWRFDPIQNTWSKVSSMLTGRAYCKTGILNNKLYVVGGVSQGPAGLVPLQSAEVFDPSTGIWSDVPSMPFSRAQVLPNAFLADMLKPIATGLTSYNGRLCVPQSLYSWPFFVDVGGEIYDPETNSWIEMPIGMGEGWPARQAGTKLSVVVDGELYAFDPSNTMDNGRIKVYDQGEDAWKVVIGKVPIYGSDDSESPYLLAGFHGKLHVITKDANRNIAVLQAELRNNLDSSVPSPSNPSQSSLHELVEPAAAAESDAVVWKIVASRCLGHVELVSCQVIDM 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01586 478 SMART fbox_2 46 86 IPR001810 GO:0005515
Car05g01586 478 Pfam F-box domain 43 83 IPR001810 GO:0005515
Car05g01586 478 MobiDBLite consensus disorder prediction 425 441 - -
Car05g01586 478 Pfam Kelch motif 218 266 IPR006652 GO:0005515
Car05g01586 478 Pfam Kelch motif 170 214 IPR006652 GO:0005515
Car05g01586 478 MobiDBLite consensus disorder prediction 1 24 - -
Car05g01586 478 Gene3D - 100 383 IPR015915 GO:0005515
Car05g01586 478 MobiDBLite consensus disorder prediction 425 444 - -
Car05g01586 478 SUPERFAMILY F-box domain 41 86 IPR036047 GO:0005515
Car05g01586 478 ProSiteProfiles F-box domain profile. 40 86 IPR001810 GO:0005515
Car05g01586 478 SUPERFAMILY Kelch motif 97 406 IPR015915 GO:0005515
Car05g01586 478 SMART kelc_smart 182 228 IPR006652 GO:0005515
Car05g01586 478 SMART kelc_smart 229 275 IPR006652 GO:0005515
Car05g01586 478 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 3 477 - -
Car05g01586 478 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 3 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01586 Car-Chr5 60459855 60462825 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01586 36 264 Miscellaneous Gene Families AT4G33900 27.468 1.11e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01586 - - gmx:100806691 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01586 05 60459855 60462825 Car05g01586 05 60459855 60462825 ECH