Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01581 ATGTGTAATCCACCTGTTAATGCTTTGGCTATTCCAATTATTTGGGCGTTGAAATATAAATTTGATGAAGCAGCAAAGAGGAATGATGTAAAAGCTATAGTTTTGACTGGCAAAGGTGGGAGATTTTCTGGTGGATTTGACATCAGTGTTATGCAGAAAGTTCACCAAACTGGCGATATCACGCTTGTACCAGATGTATCTGTGGAGTTGGTAGTCAATTCAATCGAAGATTCGAAGAAGCCTATTGTTGCAGCAGTAGAGGGGCTTGCTCTTGGAGGTGGATTAGAATTGGCCTTAGGGTGCCATGCACGTGTTGCGGCTCCGAAAGCTCAACTTGGCCTGCCAGAGCTGACACTTGACTGCGAAATAGAGCTCCTTTTTTCATTCGAATTTTTAATTATGTTGCAGATGATTGCAATGTCGATGAGGTGTATTGGCCCATGGGCAATGTTTTATCTTGCTCCTGCAGTATCTGACTATTATGTTCCTTGGAAGGATATGGTGGAGCACAAAATTCAGTCAGGATCTCACCTCTTGGACGTGAAACTTGTTCAAGTGCCAAAAATGTTGTCAGTGCTTAGGAAAGACTGGGCTCCTCTGGCTTTCTGCATATCTTTCAAGTTAGAGACAGATTCAAGCATTCTTCTAAATCAGACTAATGCAGCTCTTGAAAAGTACAAGATGCATGCAGTTGTTGCAAATGAACTCTTAACTCGCAAGGAACAAGTGGTGGTCGTCACTAGTTCTGAGAAGATCACTGTTCTGCGAGACAATGATACACCATCCCATACCAAAGATCTCGAGTTGTCATCCTCCACCGTGCTTCATCACTTCTAA 837 0.4277 MCNPPVNALAIPIIWALKYKFDEAAKRNDVKAIVLTGKGGRFSGGFDISVMQKVHQTGDITLVPDVSVELVVNSIEDSKKPIVAAVEGLALGGGLELALGCHARVAAPKAQLGLPELTLDCEIELLFSFEFLIMLQMIAMSMRCIGPWAMFYLAPAVSDYYVPWKDMVEHKIQSGSHLLDVKLVQVPKMLSVLRKDWAPLAFCISFKLETDSSILLNQTNAALEKYKMHAVVANELLTRKEQVVVVTSSEKITVLRDNDTPSHTKDLELSSSTVLHHF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01581 278 SUPERFAMILY ClpP/crotonase 2 119 IPR029045 -
Car05g01581 278 Pfam Enoyl-CoA hydratase/isomerase 3 118 IPR001753 GO:0003824
Car05g01581 278 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 83 103 IPR018376 GO:0003824
Car05g01581 278 Gene3D - 1 119 - -
Car05g01581 278 PANTHER CORNICHON-RELATED 128 260 - -
Car05g01581 278 SUPERFAMILY CoaB-like 129 252 IPR035929 -
Car05g01581 278 Pfam DNA / pantothenate metabolism flavoprotein 137 242 IPR007085 -
Car05g01581 278 PANTHER PHOSPHOPANTOTHENATE-CYSTEINE LIGASE-LIKE PROTEIN 128 260 - -
Car05g01581 278 Gene3D - 120 276 IPR035929 -
Car05g01581 278 CDD crotonase-like 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01581 Car-Chr5 60401453 60408461 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01581 1 119 Acyl Lipid Metabolism Gene Families AT4G29010 75.630 2.69e-45 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01581 K01922 - gmx:100808811 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01581 05 60401453 60408461 Car05g01581 05 60401453 60408461 ECH