Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01580 ATGGAAGAAAGTTCAGAATACATCGACATCAAGCTTTCTCCGGCGAAGCTTCCTTTCGATCTTCCTCAAGATCCGCCGCTGAAATCTAACCGCCGTCTCCGGCGAAGAGGCGACACATGGGTAGTTTCTGTGTTGGTAATAATCCACATAGGGTTTTTCATAGCGACGATGTTGGTAAACGATTGCTGGACCAATTCTCACGGGGATTGTACTCTTCCATCCCTAGGAAGGTTATCGTTTCAGCATCTCTCTGAAAATCCATTGTTAGGTCCTTCCATGTCTAAGTTGGATGAAATGGGAGCTCTTCGAAGGAACTTTTTGACGGAATATCATGAATCTTGGCGTCTTTTCACGTTTCCATTTTTGCACGCTGGACTCTTTCATCTAATCATCAATCTCTGCAGTGTCATCTATGTGGGAATTCACCTAGAACAGGAGTTTGGGCCACTACGGATTGGTATAATCTATATACTATCTGCTTTTGTGGGCACCTTAATGGCTTCTCTTTTTCTTCAAAACATCCCTGCTGTTGGTTCTTCTGGTGCTTTATATGGATTACTAGGAACATTGCTTTCAGAACTTGTTTGGAACTGGAAATTTCATACCAATAAGGTTTCAGAAATAGCATCATTAGTTTTTATCTTTGTGTGCAACTTCTTCCTTGGTTTTCTTCCTTATGTAAACAACTTTTCAAGCATTGGAGGTTTTATATCAGGATTCCTTCTAGGAACTGTTCTTTTATTCACCCCTCAGATACAACAAGTAATTCCAAATAAAGGAGATCGCATTGATTATGGTTTCAAAAGTTACATCAAGTTGAAGTTCAAGCAAAAGCTAGACAGACCAGTTACCAGAATTGTTTCTCTTATTCTCTTCACCCTGCTATTGGCTGGTTGTCTTGTTGCAGTTCTTTATGGAATCAACATCAACAGTTATTGCACATGGTGTCCATATGTTGACTGTATCCCTTTCACAAGCTGGCATTGCAAAGACAGGGAAAACTTTTGTGAGACAATGGTGAGTAATGCTCACCTAACAATGACATGTTTGGGGAATGGCAACTTCAAGGTCTTTCATTACACCAACATCTCTCGAGCAAGGATTAATGATTTGTGCAATCTGATATGTTGA 1131 0.4032 MEESSEYIDIKLSPAKLPFDLPQDPPLKSNRRLRRRGDTWVVSVLVIIHIGFFIATMLVNDCWTNSHGDCTLPSLGRLSFQHLSENPLLGPSMSKLDEMGALRRNFLTEYHESWRLFTFPFLHAGLFHLIINLCSVIYVGIHLEQEFGPLRIGIIYILSAFVGTLMASLFLQNIPAVGSSGALYGLLGTLLSELVWNWKFHTNKVSEIASLVFIFVCNFFLGFLPYVNNFSSIGGFISGFLLGTVLLFTPQIQQVIPNKGDRIDYGFKSYIKLKFKQKLDRPVTRIVSLILFTLLLAGCLVAVLYGININSYCTWCPYVDCIPFTSWHCKDRENFCETMVSNAHLTMTCLGNGNFKVFHYTNISRARINDLCNLIC 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01580 376 SUPERFAMILY Rhomboid-like 37 251 IPR035952 -
Car05g01580 376 Pfam Rhomboid family 109 247 IPR022764 GO:0004252|GO:0016021
Car05g01580 376 Gene3D - 34 249 IPR035952 -
Car05g01580 376 PANTHER RHOMBOID-LIKE PROTEIN 8 16 376 - -
Car05g01580 376 PANTHER RHOMBOID-RELATED 16 376 IPR002610 GO:0004252|GO:0006508|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01580 Car-Chr5 60396364 60399153 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01580 - - gmx:100793747 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01580 05 60396364 60399153 Car05g01580 05 60396364 60399153 ECH