Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01575 ATGAAGACTCGCGCCTCTACCAAAATCTCTGCAAAATGGATTCCAATTTTCTCTCTCTTTTCCTTCATTCTTGGCATGCTCATCACAACCAGTAGGATGTGGGAGCAACCTGAATCAAATGGTGTGATAATTTCTAAGCATCAGCGAGATCAAGAACTTCAAGTGGTTTCAGAGGATTGTGCTACCAAAAAGAAGCAGGAAAAGCCTAAGGATGAGATGAATGAATTGTACAAAACACATGAAGCTATTCAAGCCCTAGACAAGCAAGTTTCTATGCTGCAGATGGAATTAGCAGCAGCTAGAAGTTCTCGCGAAAACAACTCGAATGGCTCGGCCACCACTTCCGGCAAAGGTGCTTCCAAGAAGAAGGCATTTATAGTGATAGGTATAAACACAGCTTTCAGTAGCAGAAAGCGGCGTGATTCGGTTAGAGAAACTTGGATGCCTCAAGGTGAACAACTTCTTCAATTGGAACGGGAGAAGGGAATTGTTATCAGATTCATGATTGGCCATAGTGCAACTTCCAACAGCATTCTAGATCGAGCCATTGATTCAGAAGAAGCGCAGCACAAAGACTTCCTTCGGCTGCAACATGTTGAAGGGTATCATGAGCTTTCTGCAAAGACAAAGATTTTCTTTTCTACTGCGGTCGCATTATGGGATGCTGATTTCTATGTCAAAGTGGATGATGATGTTCATGTCAATTTAGGTGTCCTAGCAGCAACCCTTGCTCGTCATCGTTTAAAACCTAGAGTCTACATCGGGTGTATGAAATCTGGACCTGTTCTTTCTCGAAAGGATGTCAAGTACCATGAACCCGAGTTTTGGAAGTTTGGAGAAGAGGGGAACAAATACTTTCGACATGCAACCGGACAAATATATGCAATCTCTAAGGATTTGGCTACTTACATTTCCATTAACCAACCGATTTTACATAAATATGCTAATGAAGACGTCTCACTTGGTTCATGGTTCATTGGTCTTGAAGTTGAGCATATCGATGACCGCAGTATGTGCTGTGGAACCCCTCCAGATTGTGAGTGGAAGGCACAGGCAGGTAACATATGTGTTGCATCGTTCGATTGGAGCTGCAGTGGAATCTGTAAATCGGTGGAGAAGATTAAATATGTGCACTCAAAATGTGGTGAAGGAGATGGAGCCGTTTGGAGTGCTTTATTCTAA 1182 0.4281 MKTRASTKISAKWIPIFSLFSFILGMLITTSRMWEQPESNGVIISKHQRDQELQVVSEDCATKKKQEKPKDEMNELYKTHEAIQALDKQVSMLQMELAAARSSRENNSNGSATTSGKGASKKKAFIVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGHSATSNSILDRAIDSEEAQHKDFLRLQHVEGYHELSAKTKIFFSTAVALWDADFYVKVDDDVHVNLGVLAATLARHRLKPRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKYANEDVSLGSWFIGLEVEHIDDRSMCCGTPPDCEWKAQAGNICVASFDWSCSGICKSVEKIKYVHSKCGEGDGAVWSALF 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01575 393 Coils Coil 83 103 - -
Car05g01575 393 MobiDBLite consensus disorder prediction 100 117 - -
Car05g01575 393 MobiDBLite consensus disorder prediction 97 117 - -
Car05g01575 393 Gene3D - 115 339 - -
Car05g01575 393 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 8 385 IPR002659 GO:0006486|GO:0016020|GO:0016758
Car05g01575 393 Pfam Galactosyltransferase 138 335 IPR002659 GO:0006486|GO:0016020|GO:0016758
Car05g01575 393 PANTHER HEXOSYLTRANSFERASE 8 385 - -
Car05g01575 393 Pfam Domain of unknown function (DUF4094) 10 103 IPR025298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01575 Car-Chr5 60342128 60345910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01575 1 393 Glycosyltransferase AT1G77810 72.911 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01575 K20855 - gmx:100776715 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01575 05 60342128 60345910 Car05g01575 05 60342128 60345910 ECH