Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01560 ATGCGCCAACCACTTCTCTCTAACCACCAAACAGACCTTAACAACAACATTAGTAACTCACACAACCCGCCTACGCTCATTTCTACCGCCCGTAGCCGCTCACAATTCACCTGCCGAAGAGTTTCACCATTCGAAACTCAAACAGCTTCTGAAACGCGCTTCCCCAACGGAGATTTTTATATGGGAAGTTACTCCGGAAACGCACCAAACGGATCCGGAAAATACTCATGGAATGACGGTTGTATCTACGAAGGAGAATGGAAAAGAGGAAAAGCATCTGGTAAAGGAAAATTCTCGTGGCCTTCAGGTGCTACCTACGAAGGTGAATTCAAATCGGGTCGAATGGAAGGGTTCGGAAAATTCACCGGATCCGACGGAGATACTTACGCTGGTTCATGGAGCTCCGATAGAAAACACGGGTACGGAAAGAAACGTTACGTTAACGGCGATTATTACGAAGGTTGGTGGAAAAAGAATTTCCAAGAAGGAAACGGAAGGTACGTTTGGAAAAACGGGAACGAATATATAGGTGAGTGGGAAAACGGCGTTATTAATGGAAGAGGTACACTTATTTGGTCGAACGGGAACCGTTACGAAGCTGAATGGGAGAACGGTGTTCCAAAAGGACAAGGTGTTTTCACTTGGCCTGATGGAAGTTGTTACGTTGGTTGTTGGAATAAAGATATGAAGATGAAGTTATTGAATGGGAATTTTTACCCTGGTAACAATGGAGAGTTTTTGGGTGATGATTTTGGTTTAACAACGAGGAAAAGGTCTTCTTCTGTTGAAGGTGAAAAGTGTTTGAGTAAGATTTGTATATGGGAATCGGATGGTGAAGCTGGTGATATAACTTGTGATATAATTGATAATGTATCGGTTTTGAATAATAGGATTGGAACTGAGAATGTTTCAGATCCAAAAGAGATTAAGATATTTCAACGTAATTCTTGTTGTTTTGCATCTGAGGTTAAGAGACCTGGGATAACTATCTCTAAAGGGCATAAGAATTATGATCTTATGCTTAATTTGCAATTGGGTATAAGGTACTCTGTTGGAAAGGAAGCTTCCATAATCCGAGGGCTTAAACAAAGTGATTTTGATCCGATGGAGAAGTTTTGGACAAAGTTTCCTCCTGAAGGATCCAAGATTACCCCACCGCATCAATCAATGGAGTTTCGCTGGAAGGATTACTGCCCTATGGTTTTTAGACAATTGAGGAAGCTTTTTCAGGTGGATTCTGCTGATTACATGTTAGCTGTATGCGGGAATGAGGCCCTCAGGGAGCTTTCATCTCCTGGGAAAAGTGGAAGCTTCTTCTATTTGACACAAGATGATAGATTTATGATAAAGACAGTGAAAAAATCCGAAGTCAAGGTACTGCTTCGGATGCTTCGAAGTTATTACCAACATGTTTCTCAGTACGAGAATTCACTTGTGACAAAATTCTACGGAGTGCATTGTGTCAAACCAATTGGAGGCCCGAAGACTCGGTTCATTGTAATGGGCAATCTTTTCTGCTCTGAATATCCAATCCATAGACGGTTTGATTTGAAAGGATCGTCACATGGGCGTACAACAGATAAAACTGAAGAGGAGATTGATGAAACTACCACCCTCAAGGACCTGGATCTCAATTTCGTGTTTCGCCTACAAAGAAATTGGTTCAAGGATCTCATCAAACAAATTGAGCGGGATTGCGAGTTTTTGGAAGCTGCGGGAATTATGGATTACAGTCTTTTGGTTGGCATTCATTTTCGTGATGATAATACATATGACAAAATGGGATTGTCACCATTTCTTTTGCGCACTGGCAGGCAGGACTCTTATCAGAGTGAAAAGTTCATGCGTGGTTATCGCTTCCTTGAAGCAGAGCTACAGGACAGGGACCGAGTCAAGTCTGGCCGGAAATCATTGATTAGATTAGGAGCTAATATGCCCGCAAGAGCAGAGCGTATGGCCCGGAGGAGTGATTTCGACCAATACACAAGTGTTGGAATCAGCCATTCGACTCCATATCGCATTGGGGAGACCTACGATGTTGTTCTATATTTTGGGATTATAGACATTTTGCAAGATTATGACATCAGCAAGAAGTTGGAACACGCATACAAGTCCTTGCAGGTTGATCCTTCCTCAATTTCAGCCGTTGATCCAAAGCTCTACTCGAAGAGGTTTCGTGATTTTGTTGGGAGAATATTCAGTGAAGACCGGTAG 2214 0.4237 MRQPLLSNHQTDLNNNISNSHNPPTLISTARSRSQFTCRRVSPFETQTASETRFPNGDFYMGSYSGNAPNGSGKYSWNDGCIYEGEWKRGKASGKGKFSWPSGATYEGEFKSGRMEGFGKFTGSDGDTYAGSWSSDRKHGYGKKRYVNGDYYEGWWKKNFQEGNGRYVWKNGNEYIGEWENGVINGRGTLIWSNGNRYEAEWENGVPKGQGVFTWPDGSCYVGCWNKDMKMKLLNGNFYPGNNGEFLGDDFGLTTRKRSSSVEGEKCLSKICIWESDGEAGDITCDIIDNVSVLNNRIGTENVSDPKEIKIFQRNSCCFASEVKRPGITISKGHKNYDLMLNLQLGIRYSVGKEASIIRGLKQSDFDPMEKFWTKFPPEGSKITPPHQSMEFRWKDYCPMVFRQLRKLFQVDSADYMLAVCGNEALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLLRMLRSYYQHVSQYENSLVTKFYGVHCVKPIGGPKTRFIVMGNLFCSEYPIHRRFDLKGSSHGRTTDKTEEEIDETTTLKDLDLNFVFRLQRNWFKDLIKQIERDCEFLEAAGIMDYSLLVGIHFRDDNTYDKMGLSPFLLRTGRQDSYQSEKFMRGYRFLEAELQDRDRVKSGRKSLIRLGANMPARAERMARRSDFDQYTSVGISHSTPYRIGETYDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSISAVDPKLYSKRFRDFVGRIFSEDR 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01560 737 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 322 503 IPR027484 -
Car05g01560 737 CDD PIPKc_AtPIP5K_like 336 732 - -
Car05g01560 737 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 35 736 IPR023610 -
Car05g01560 737 SMART morn 173 194 IPR003409 -
Car05g01560 737 SMART morn 196 217 IPR003409 -
Car05g01560 737 SMART morn 81 102 IPR003409 -
Car05g01560 737 SMART morn 150 171 IPR003409 -
Car05g01560 737 SMART morn 104 125 IPR003409 -
Car05g01560 737 SMART morn 127 148 IPR003409 -
Car05g01560 737 SMART morn 58 79 IPR003409 -
Car05g01560 737 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 421 731 IPR002498 GO:0016307|GO:0046488
Car05g01560 737 Pfam MORN repeat 198 219 IPR003409 -
Car05g01560 737 Pfam MORN repeat 129 150 IPR003409 -
Car05g01560 737 Pfam MORN repeat 106 128 IPR003409 -
Car05g01560 737 Pfam MORN repeat 83 104 IPR003409 -
Car05g01560 737 Pfam MORN repeat 175 197 IPR003409 -
Car05g01560 737 Pfam MORN repeat 60 81 IPR003409 -
Car05g01560 737 Pfam MORN repeat 152 173 IPR003409 -
Car05g01560 737 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 147 234 - -
Car05g01560 737 MobiDBLite consensus disorder prediction 1 23 - -
Car05g01560 737 Gene3D - 131 181 - -
Car05g01560 737 Gene3D - 57 117 - -
Car05g01560 737 Gene3D - 182 239 - -
Car05g01560 737 Gene3D - 504 733 - -
Car05g01560 737 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 54 159 - -
Car05g01560 737 PIRSF PIP5K_plant 5 250 IPR017163 GO:0005524|GO:0016308
Car05g01560 737 PIRSF PIP5K_plant 249 737 IPR017163 GO:0005524|GO:0016308
Car05g01560 737 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 329 733 IPR002498 GO:0016307|GO:0046488
Car05g01560 737 SMART PIPK_2 362 734 IPR002498 GO:0016307|GO:0046488
Car05g01560 737 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 35 736 - -
Car05g01560 737 SUPERFAMILY SAICAR synthase-like 332 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01560 Car-Chr5 60128376 60133058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01560 30 736 Acyl Lipid Metabolism Gene Families AT1G77740 72.346 0.0 1066
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01560 K00889 - gmx:100813118 1179.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01560 05 60128376 60133058 Car05g01560 05 60128376 60133058 ECH
Car05g01560 05 60128376 60133058 Car03g01856 03 64697006 64700277 PCT