Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01559 ATGGAGTATTCATATTTGCTGGACCAAGCTTATGAGTGGGGAAAAAGGGGAGATAGACTCATGAGGATTCTCTATGTCGCTGCTTTTGCTGTATCTGCCTATGCTTCAACCGAAGGAAGAATTTGCAAACCATTTAATCCATTACTTGGGGAAACCTATGAGGCTAATTATCCAGATAAAGGCCTTCGTTTTTTCTCAGAGAAGGTCAGCCATCACCCTATGATAGTTGCATGTCACTGTGAGGGTACGGGTTGGAAATTTTGGGGGGATAGCAACTTAAAAAGCAAATTTTGGGGACGGTCAATTCAGCTTGACCCTGTTGGTACTTTGACTTTGGAATTTGATGATGGGGAAGTTTTCCAGTGGAGCAAGGTTACGACATCAATATACAATCTCATATTGGGAAAGCTTTACTGTGATCACTATGGTACGATGCGTATAGAGGGAAACCAAGAGTACTCTTGTAAGCTGAAATTCAAGGAACAATCAATAATTGATCGAAATCCTCATCAGGTTCATGGTATAGTCCAAGATAGGAACGGCAAAACAGTATCGACCTTGTTCGGAAAATGGGATGAAAGCATGCATTATGTTAATGGAGACTACAACGGGAAGGGGAAAAGTCATGAATCTTTGTCAGACGCCCATCTACTCTGGAAGCGAAGCAAGCCTCCCATGTTTCCCACTAGATATAACTTCACTCGCTTTGCCATCACGTTAAATGAACTTACCCCTGGATTGAAGGAGAAATTGCCGCCTACAGATTCCAGGTTAAGACCAGACCAACGGTATTTAGAAAATGGGGAGTATGAGATGGCAAATTCAGAAAAGTTACGGCTAGAGCAGCGGCAACGGCAGGCCCGGAAGATGCAAGAGAGTGGCTGGAAACCGCGATGGTTTGCTAAGGACAAAGCGAGTGGATCATACCGCTACATTGGAGGGTATTGGGAGGCTCGAGAAAAAGGAGACTGGGATTCCTGTCCTGACATCTTTGGCCAAATTTCTCCTGATCATCTCTCCGACGAAATTCAAATTACATCTTAG 1044 0.4387 MEYSYLLDQAYEWGKRGDRLMRILYVAAFAVSAYASTEGRICKPFNPLLGETYEANYPDKGLRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGTLTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIEGNQEYSCKLKFKEQSIIDRNPHQVHGIVQDRNGKTVSTLFGKWDESMHYVNGDYNGKGKSHESLSDAHLLWKRSKPPMFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYEMANSEKLRLEQRQRQARKMQESGWKPRWFAKDKASGSYRYIGGYWEAREKGDWDSCPDIFGQISPDHLSDEIQITS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01559 347 Coils Coil 270 290 - -
Car05g01559 347 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 338 IPR000648 GO:0008289
Car05g01559 347 Pfam Oxysterol-binding protein 1 320 IPR000648 GO:0008289
Car05g01559 347 Gene3D - 51 224 - -
Car05g01559 347 SUPERFAMILY Oxysterol-binding protein-like 1 342 IPR037239 -
Car05g01559 347 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 1 338 - -
Car05g01559 347 Gene3D - 262 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01559 Car-Chr5 60104293 60107232 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01559 K20456 - gmx:100137077 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01559 05 60104293 60107232 Car05g01559 05 60104293 60107232 ECH