Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01557 ATGGCATCCTCAGCTTTGGATTGTATTTCGTTGGTTTTATGTGGCAAATCAAACGCAGAGATTGAAACTGCTATTGCTATTAAGGCTAATAACACCCTCAAGCTCCCTGACAAGGGAGAATTATCCCTTGTTTTGCATTCAGAATTGAATAAAAGTGTTGAACAAAATTCCTTCCAAGTTAGTTCCTTCATGAATTCTCTTTCCACCAATCAATTTGGCAGGCTTCTTATTTGGTCTCCACGGCTAACTTCAACACATGATGTCGTGTCAAACAACTTTTGTGAGCTTCCGCTTGGTACTGTATGTGTTGCTGATATTCAGAACAAGGGACGAGGTCGGTCAAAGAATGTCTGGGAGTCTCCATTAGGTTGCCTGATGTTTTCTTTTACACTGCAAATGGAGGATGGACGGGTCGTACCTTTAGTTCAGTATGTGGTTTCCCTGGCTATCACAGAGGCAATCAAGGATATATGTGACAAAAATGGATTACCTTGCATTGATGTTAAAATCAAGTGGCCAAATGATCTCTATTTAAATGGCTTTAAAGTTGGAGGCATTCTTTGCACCTCAACATATAAATCAAAGAAGTTTAATATCAGTGCAGGAATAGGATTGAATGTCCATAATGAGAAGCCAACAACATCCTTGAATACAGTTCTAAGAGAATTGTCCGTGGGAGCTTACCAATTTCAAAGAGAAGATGTTCTGGCAGCCTTTTTTAACAAATTCGAGATTTTTTTTGATCTATTTGTGAATCAAGGATTTCAAACCCTAGAGGAACTATATTACAAGACATGGCTGCACAGCGGACAGAGAGTTGTTGTACAGGAAAAGAACGAGGACAAAGTGGTCGAACATGTGGTAACTGTTCAGGGTTTAACATCCTCAGGATATTTATTGGCCATCGGTGATGACAATCAAATGTGTGAGCTCCACCCTGATGGTAATAGCTTTGACTTTTTCAAAGGACTGGTCAGAAGGAAACTTAACTGA 993 0.3968 MASSALDCISLVLCGKSNAEIETAIAIKANNTLKLPDKGELSLVLHSELNKSVEQNSFQVSSFMNSLSTNQFGRLLIWSPRLTSTHDVVSNNFCELPLGTVCVADIQNKGRGRSKNVWESPLGCLMFSFTLQMEDGRVVPLVQYVVSLAITEAIKDICDKNGLPCIDVKIKWPNDLYLNGFKVGGILCTSTYKSKKFNISAGIGLNVHNEKPTTSLNTVLRELSVGAYQFQREDVLAAFFNKFEIFFDLFVNQGFQTLEELYYKTWLHSGQRVVVQEKNEDKVVEHVVTVQGLTSSGYLLAIGDDNQMCELHPDGNSFDFFKGLVRRKLN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01557 330 ProSiteProfiles Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. 61 251 IPR004143 GO:0036211
Car05g01557 330 PANTHER HOLOCARBOXYLASE SYNTHETASE (BIOTIN-(PROPRIONYL-COA-CARBOXYLASE (ATP-HYDROLYSING)) LIGASE) 29 328 - -
Car05g01557 330 TIGRFAM birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 79 304 IPR004408 GO:0004077|GO:0036211
Car05g01557 330 PANTHER BIOTIN PROTEIN LIGASE 29 328 - -
Car05g01557 330 CDD BPL 76 246 IPR004408 GO:0004077|GO:0036211
Car05g01557 330 Gene3D Bira Bifunctional Protein; Domain 2 64 265 IPR045864 -
Car05g01557 330 SUPERFAMILY Class II aaRS and biotin synthetases 64 266 IPR045864 -
Car05g01557 330 Pfam Biotin protein ligase C terminal domain 268 323 IPR003142 GO:0036211
Car05g01557 330 Pfam Biotin/lipoate A/B protein ligase family 79 206 IPR004143 GO:0036211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01557 K01942 - gmx:100818402 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01557 05 60083079 60087422 Car05g01557 05 60083079 60087422 ECH