Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01550 ATGGAAGAGACTCGAACGGTGCAAAACATAGCTTCCATATACAAAGAAATCGTTCCTGAAGAGTTCGTTAGGTCCGTAACAGAACAGCCAGGAATCACAACGGTTCGTGGGACCCAATTAGAGGTTCCTATAATTGACTTTAGTAACCCTGACGAGGAAAAAGTGGTGCGTGAGATTATTGATGCAAGTAGTGAATGGGGTATGTTCCAAATTGTGAATCATGAGATACCTACCGAACTTATAACCAAACTTCAAGTTGTTGGAAAAACGTTTTTTGAGTTACCAATAGAAGAAAAGGAGAAATATGCTAAACCTCTTGATTCTCAATCAATTGAAGGGTATGGGTCTAAGCTTAGTAAAGAGGGTTGGGGGTTTGAGGGTCACGAGTTAAAGGAGTATGCAGGTTGTGATAACATAGTTCATCTCTTAAAAATCAACTATTACCCACCTTGCCCCTGCCCTGATCTCGTGCTCGGTGTGCCAGCTCATACTGACATGTGCTTTATCACCCTTCTTGTGCCCAATGAGATACAGGGTCTTCAAGCCTCTAGAGATGAACATTGGACAACAGTGAGCAAAGATGAAACAAGAATCTCGTGGCCAGTGTTCATAGAGCCTCAACCAGATCAAGAAGTTGGCCCTCGCCCAAAGCTGGTTAACCAAGACAACCCACCAAAATACAAGAGCAAGAAATACAAAGATTATGCTTATTGTAAGCTCAACAAGATCCCTCAATAA 738 0.4214 MEETRTVQNIASIYKEIVPEEFVRSVTEQPGITTVRGTQLEVPIIDFSNPDEEKVVREIIDASSEWGMFQIVNHEIPTELITKLQVVGKTFFELPIEEKEKYAKPLDSQSIEGYGSKLSKEGWGFEGHELKEYAGCDNIVHLLKINYYPPCPCPDLVLGVPAHTDMCFITLLVPNEIQGLQASRDEHWTTVSKDETRISWPVFIEPQPDQEVGPRPKLVNQDNPPKYKSKKYKDYAYCKLNKIPQ 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01550 245 SUPERFAMILY Clavaminate synthase-like 6 243 - -
Car05g01550 245 Pfam 2OG-Fe(II) oxygenase superfamily 141 195 IPR044861 -
Car05g01550 245 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 187 242 - -
Car05g01550 245 Pfam non-haem dioxygenase in morphine synthesis N-terminal 42 120 IPR026992 -
Car05g01550 245 Gene3D - 1 128 IPR027443 -
Car05g01550 245 PANTHER FLAVONOL SYNTHASE/FLAVANONE 3-HYDROXYLASE 5 121 - -
Car05g01550 245 Gene3D - 129 192 IPR027443 -
Car05g01550 245 Gene3D - 193 244 IPR027443 -
Car05g01550 245 PANTHER FLAVONOL SYNTHASE/FLAVANONE 3-HYDROXYLASE 122 190 - -
Car05g01550 245 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 121 - -
Car05g01550 245 PANTHER FLAVONOL SYNTHASE/FLAVANONE 3-HYDROXYLASE 187 242 - -
Car05g01550 245 MobiDBLite consensus disorder prediction 207 230 - -
Car05g01550 245 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 122 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01550 Car-Chr5 60006268 60009119 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01550 38 236 Glycosyltransferase AT5G59530 24.746 1.46e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01550 K05278 - gmx:100816829 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01550 05 60006268 60009119 Car05g01550 05 60006268 60009119 ECH