Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car05g01543 | ATGGAAACTCAGAAGAGTCAATCAAAGCTAACAAGAACACAATCCTCGCTCCTCAGTTTCTCCCCAACCACAATCCGATCATCCATTCAAAGCCTTTCATCAATCAACGATTACTACGATGAAGAAGACGACAAAAACAACAAAAAGAAGACCAAGAAACCCCAAACCCATACCCAGAGATCCTCTTATTACAATTCAACTCCTCGAACCGGGTCGACCCGATTAACCGCTCCAATTATCGCTGTTGTTTCGTTCGGTTTCCTCGGCGCGTGTTCTTTCTTCTTCTACTTCTCCTTCCTCGGGAGCAGCGACGAGGTGCCGACCTCGGAGAATCTCTTACTAGCGTTGATTTTCATAGCCGTTGCGCTTTACTTCGCGTCGAAGAACAAAGGTTTAATCAACCACGGAGTTTCGGTTCTGAAGAATCGGTGGGAAGGGAACGTGAAACGGTTCGGGTTTACAAAAACCGAATCGAAACCGGTCCAGTGGTTCATCGGCGATTCAACGAAAGAAAGTGTGAAAAAGAAGAGTGTGAGGGAAGGTGTTGAGTTTTACAGCAATGGTGATTTTTACGAAGGGGAGTTTCATAAAGGAAGGAGTAATGGGAGTGGTGTTTACAATTACTTTGTGAATGGAAGATATGAAGGTGATTGGGTTGATGGAAGATATGATGGGTATGGAATTGAGAGTTGGGCTAGAGGGAGTCGTTATAGAGGTCAGTATAGGAAAGGAATGAGAGATGGTTATGGTGTTTATAGATTCTATACTGGTGATTCTTATGCTGGTGAATGGTGTAATGGTCAGAGTCATGGTGTTGGTCTTCAAACTTGTTCTGATGCTAGCACTTATATTGGTCACTTTAAACATGGTGTTAAACATGGTCTTGGTTGTTACCATTTCAGAAATGGAGATAGATATGCAGGAGAGTATTTTGGAGACAAAATTCATGGATTTGGAGTCTATCACTTTGCTAATGGACATTGTTATGAAGGAGCATGGCACGAGGGTCGCAGGCAAGGTCTAGGATCGTATACTTTTCGAAACGGTGATCGAAGATGTGGTGAATGGGATGCTGGAAATCTCAAGCATCCTTTGCCACAACTAACTGATGTTGTCCTTAGAGCAATTCAGGCTGCTAGGAAAACGGCTGAGAATGCGATAAACCTTAAGCGTGTCGATGATCAAGTTAACAAAGCAGTGATCGCTGCTAACAAGGCCGCCACAGCTGCTAGAGTTGCTGCTGTGAAGGCTGTTCAGAACAGGATGGATGGAAAATTTTGTGATACTTTTGTCTAA | 1296 | 0.436 | METQKSQSKLTRTQSSLLSFSPTTIRSSIQSLSSINDYYDEEDDKNNKKKTKKPQTHTQRSSYYNSTPRTGSTRLTAPIIAVVSFGFLGACSFFFYFSFLGSSDEVPTSENLLLALIFIAVALYFASKNKGLINHGVSVLKNRWEGNVKRFGFTKTESKPVQWFIGDSTKESVKKKSVREGVEFYSNGDFYEGEFHKGRSNGSGVYNYFVNGRYEGDWVDGRYDGYGIESWARGSRYRGQYRKGMRDGYGVYRFYTGDSYAGEWCNGQSHGVGLQTCSDASTYIGHFKHGVKHGLGCYHFRNGDRYAGEYFGDKIHGFGVYHFANGHCYEGAWHEGRRQGLGSYTFRNGDRRCGEWDAGNLKHPLPQLTDVVLRAIQAARKTAENAINLKRVDDQVNKAVIAANKAATAARVAAVKAVQNRMDGKFCDTFV | 431 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car05g01543 | 431 | PANTHER | RADIAL SPOKE HEAD 10 HOMOLOG B-LIKE | 17 | 424 | - | - | |
| Car05g01543 | 431 | MobiDBLite | consensus disorder prediction | 39 | 69 | - | - | |
| Car05g01543 | 431 | Pfam | MORN repeat | 306 | 327 | IPR003409 | - | |
| Car05g01543 | 431 | Pfam | MORN repeat | 214 | 236 | IPR003409 | - | |
| Car05g01543 | 431 | Pfam | MORN repeat | 260 | 279 | IPR003409 | - | |
| Car05g01543 | 431 | Pfam | MORN repeat | 237 | 258 | IPR003409 | - | |
| Car05g01543 | 431 | Pfam | MORN repeat | 329 | 351 | IPR003409 | - | |
| Car05g01543 | 431 | Pfam | MORN repeat | 191 | 208 | IPR003409 | - | |
| Car05g01543 | 431 | Pfam | MORN repeat | 283 | 305 | IPR003409 | - | |
| Car05g01543 | 431 | SMART | morn | 304 | 325 | IPR003409 | - | |
| Car05g01543 | 431 | SMART | morn | 258 | 279 | IPR003409 | - | |
| Car05g01543 | 431 | SMART | morn | 189 | 211 | IPR003409 | - | |
| Car05g01543 | 431 | SMART | morn | 327 | 348 | IPR003409 | - | |
| Car05g01543 | 431 | SMART | morn | 212 | 233 | IPR003409 | - | |
| Car05g01543 | 431 | SMART | morn | 235 | 256 | IPR003409 | - | |
| Car05g01543 | 431 | SMART | morn | 281 | 302 | IPR003409 | - | |
| Car05g01543 | 431 | Gene3D | - | 221 | 265 | - | - | |
| Car05g01543 | 431 | Gene3D | - | 174 | 220 | - | - | |
| Car05g01543 | 431 | Gene3D | - | 266 | 312 | - | - | |
| Car05g01543 | 431 | Gene3D | - | 313 | 375 | - | - | |
| Car05g01543 | 431 | PANTHER | PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED | 17 | 424 | - | - | |
| Car05g01543 | 431 | SUPERFAMILY | Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 232 | 359 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car05g01543 | Car-Chr5 | 59931779 | 59933977 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Car05g01543 | 186 | 361 | Acyl Lipid Metabolism Gene Families | AT1G21980 | 35.795 | 1.60e-28 | 116 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car05g01543 | - | - | jre:108988356 | 609.757 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Car05g01543 | 05 | 59931779 | 59933977 | Car05g01543 | 05 | 59931779 | 59933977 | ECH |