Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01541 ATGGGTCTCACGAAGGAACAGTTACTTCAGCGGTTACAGGAGCTTCAGATTCAATTTTCCAAGTATGAACATCCAGCTGTTTTGACCGTTGAAGCTCAGGCAAAATATGTTGGAAATTTGGGCGGTGGTCTCAGTAAAAATCTCTTTTTGAAGGACAAGAAAAATAGGTTTTACGTTGTTTCTGCTTTAGCTGATACCAAAGTCGATCTGAAAGCAGTGTTATCTCAGCGGCTTGGTTTGGGAAAAGGTGGTTTGAGAATGGCACCCGAAGAGGCTTTAGCTGAAATACTTCAGGTATCTTTGGGTTGTGTCACACCATTTGCAGTAGTGAATGAATCAGCACGAGATGTGTCGCTGCTATTAGATCAAGGATTCAAGACACAGGAGCACTGTTTCTTCCATCCATTGTCAAATGACATGTCCATATCTCTAAATGTACGTGATCTTGACACATTTCTTAAATCAATAGGAAGAGATCCCTCATATGTTGATTTGGAGGCCAATCCTGCAGTGGGGAAAGATCAACCCCCTGATCTAGCAGCACTAGTTCCATCTGGTTCAATAGTTTTGCCTGATCAACCAGGAAAGCAGTCATCTGCAGAAGTTCCTCCCAGGGATGGAAACATTGTTTCTGTAGATAATAAGTCCAAGACAGTTCCAGCCAAAGTTGTCAAGCCACTGGTTGGGAATAATTCGAAAGGAACACTCGACAAAAATGTTCAGTCATCAAGATCCTATGCAGATGTTGGCCAATTAGTTGAAGAAATATTGCATAAAACATCAAAATTATTGCTTTCAGAGATCAATGAAGAAACTATAAAGATTCATGGAGAGCAGCTGGGTACTACGGTATCTGACAAATTACAGAAACACCTCAGCTCAGATTTTAAAAATCTTGCTATGATGTTTAAGAACACTGCATATACAGAAGGGTTCCATGCTGGTACTCACCATCAGCCTAGACGCTGA 969 0.4118 MGLTKEQLLQRLQELQIQFSKYEHPAVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRFYVVSALADTKVDLKAVLSQRLGLGKGGLRMAPEEALAEILQVSLGCVTPFAVVNESARDVSLLLDQGFKTQEHCFFHPLSNDMSISLNVRDLDTFLKSIGRDPSYVDLEANPAVGKDQPPDLAALVPSGSIVLPDQPGKQSSAEVPPRDGNIVSVDNKSKTVPAKVVKPLVGNNSKGTLDKNVQSSRSYADVGQLVEEILHKTSKLLLSEINEETIKIHGEQLGTTVSDKLQKHLSSDFKNLAMMFKNTAYTEGFHAGTHHQPRR 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01541 322 PANTHER PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED 1 321 - -
Car05g01541 322 Pfam Aminoacyl-tRNA editing domain 24 152 IPR007214 GO:0002161
Car05g01541 322 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 1 321 IPR040285 -
Car05g01541 322 Gene3D - 2 172 IPR036754 GO:0002161
Car05g01541 322 SUPERFAMILY YbaK/ProRS associated domain 3 165 IPR036754 GO:0002161
Car05g01541 322 CDD PrdX_deacylase 17 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01541 Car-Chr5 59897123 59901469 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01541 - - ahf:112764287 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01541 05 59897123 59901469 Car05g01541 05 59897123 59901469 ECH