Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01539 ATGGCAAAAGCCTTCAACCTAAGTTCAGGAACCCGAATCACTCTAATTTTGTTGATATGCTTCACCATTCTTACCGAAGCCATTTGGTTAAATATCCCCAGTTCGGGAACTAAGTGTGTGTCAGAGGAAATCCAAACACACGTCGTCGTTTTAGCTACTTACTATGTTGTTTCTGATGATACCAAGGGTCACCCGCTTCCTACTATTTCTGCCAAGGTGACATCTCCATACGGAAATAATCTTCACAACAATGAAAATGTTACTCAAGGTCAATTTGCATTTACTTCTACTGAGAGTGGGAACTATGTGGCATGCTTTTGGATGGATGGTAAAAATCTAGATGGTTCCTCAATCAGCCTTGATTGGAAAACTGGAATCTCTGCCAAAGATTGGGACTCTGTTGCAAAAAAAGAAAAGATAGAGGGAGTTGAACTTGAGCTAAGGAAACTTGAAGGAGCTGTGGAAGCCATCCACGAGAATCTATTATATTTAAAGAATAGGGAAGCGGAAATGAGAGAAGTAAGTGAAGCAACAAATGGCAGAGTTGCATGGTTCAGTATAATGTCTCTCGGCGTCTGCATTTTGGTTTCGGTGTTGCAGCTGTGGTATCTGAGAAGCTACTTTCGGAAGAAGAAACTCATATAG 645 0.4109 MAKAFNLSSGTRITLILLICFTILTEAIWLNIPSSGTKCVSEEIQTHVVVLATYYVVSDDTKGHPLPTISAKVTSPYGNNLHNNENVTQGQFAFTSTESGNYVACFWMDGKNLDGSSISLDWKTGISAKDWDSVAKKEKIEGVELELRKLEGAVEAIHENLLYLKNREAEMREVSEATNGRVAWFSIMSLGVCILVSVLQLWYLRSYFRKKKLI 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01539 214 SMART EMP24_GP25L_2 27 209 IPR009038 -
Car05g01539 214 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 10 214 IPR015720 -
Car05g01539 214 Pfam emp24/gp25L/p24 family/GOLD 29 209 IPR009038 -
Car05g01539 214 PANTHER EMP24/GP25L/P24 FAMILY PROTEIN 10 214 - -
Car05g01539 214 Coils Coil 140 160 - -
Car05g01539 214 ProSiteProfiles GOLD domain profile. 37 149 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01539 Car-Chr5 59871301 59874088 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01539 K20352 - gmx:100820037 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01539 05 59871301 59874088 Car05g01539 05 59871301 59874088 ECH