Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01526 ATGTTATACGGCGTCAACACCTCTTCCTTCACTTCAATCTTACCCTTTCCTCCCAGAAAACAACAACCCACTCTTTTTTTTCCATCCAAATCCATTTCCTGCACCCTTCCAGGAGCTGTTGCTGAACCAAAAGCTACAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCGTGGGGTAGAAGTTGAAAGACCCCCGGTTTGGCTTATGAGGCAAGCCGGGAGGTACATGAAGAGTTACCAAGTCATCTGTGAGAAATATCCTTCATTCCGTGAAAGGTCTGAAAATGTTGATCTTGTGGTGGAAATTTCATTGCAACCATGGAAAGTTTTCAAGCCTGATGGGGTGATTTTATTCTCAGACATTCTGACCCCACTTTCTGGGATGAATATACCCTTTGATATAGTCAAAGGTAAGGGTCCTGTCATATTTGATCCCATTCACACAGCAGGTCAAGTTGATCAAGTTAGGGAGTTTATTCCCGAAGATTCAGTTCCATATGTTGGTGAAGCACTAACAATTTTGAGGAAAGAGGTGGATAATAAAGCTGCAGTCCTAGGTTTTGTGGGGGCTCCATTCACCCTGGCATCGTATGTGGTTGAAGGTGGGTCATCAAAACACTTCTCAAAAATAAAGAGATTGGCTTTCTCTGAACCCAAGATTCTCCACTCATTACTGCAGAAATTTACAACATCAATGGCAAGATACATACAATACCAAGCTGACAATGGAGCTCAAGCTGTTCAGATATTTGATTCGTGGGCAACAGAGCTTAGTCCTGTGGATTTTGAACAATTCAGTTTACCTTACTTGAAGCAGATTATCGATACTGTGAAGAAAAGCCATCCAGAACTCCCTCTTATCCTCTATGCAAGTGGATCAGGGGGATTGCTTGAGAGAATAGCTTTGACTGGTGTGGATGTAGTTAGCTTGGATTGGACGGTTGATATGGCTGATGGTAGAAGGAGACTGGGACCAAATATAGCTGTACAAGGTAATGTTGATCCTGGTGTTCTCTTTGGTTCAAGAGAGCTCATCACTGATAGGATATATGATACGGTGAGGAAAGCTGGTAGAGGGAAACATATCTTGAATCTTGGTCATGGCATTGTAGTAGGTACACCTGAGGAGAATGTAGCACATTTTTTTGAGGTTGCAAAAGGAATCAGATACTAA 1293 0.3751 MLYGVNTSSFTSILPFPPRKQQPTLFFPSKSISCTLPGAVAEPKATNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVEVERPPVWLMRQAGRYMKSYQVICEKYPSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPVIFDPIHTAGQVDQVREFIPEDSVPYVGEALTILRKEVDNKAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSEPKILHSLLQKFTTSMARYIQYQADNGAQAVQIFDSWATELSPVDFEQFSLPYLKQIIDTVKKSHPELPLILYASGSGGLLERIALTGVDVVSLDWTVDMADGRRRLGPNIAVQGNVDPGVLFGSRELITDRIYDTVRKAGRGKHILNLGHGIVVGTPEENVAHFFEVAKGIRY 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01526 430 ProSitePatterns Uroporphyrinogen decarboxylase signature 1. 105 114 IPR000257 GO:0004853|GO:0006779
Car05g01526 430 TIGRFAM hemE: uroporphyrinogen decarboxylase 97 426 IPR006361 GO:0004853|GO:0006779
Car05g01526 430 CDD URO-D 97 426 IPR006361 GO:0004853|GO:0006779
Car05g01526 430 Hamap Uroporphyrinogen decarboxylase [hemE]. 89 429 IPR006361 GO:0004853|GO:0006779
Car05g01526 430 Gene3D - 93 430 IPR038071 -
Car05g01526 430 Pfam Uroporphyrinogen decarboxylase (URO-D) 97 426 IPR000257 GO:0004853|GO:0006779
Car05g01526 430 Coils Coil 97 97 - -
Car05g01526 430 PANTHER METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED 95 430 - -
Car05g01526 430 ProSitePatterns Uroporphyrinogen decarboxylase signature 2. 225 241 IPR000257 GO:0004853|GO:0006779
Car05g01526 430 PANTHER UROPORPHYRINOGEN DECARBOXYLASE 2, CHLOROPLASTIC 95 430 - -
Car05g01526 430 SUPERFAMILY UROD/MetE-like 96 429 IPR038071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01526 Car-Chr5 59645037 59648560 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01526 K01599 - gmx:100800753 648.662