Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01522 ATGGAGGCAGTTCAATCATGGGTTTCAAACAACAAACTCACCAGCATTGGGGCACTGTGGGCCTCTGGAATTGGAGCATCACTTGTTGCTTATTCACGAGTTAAATCTCCAATGAAGCCAAGTCTAAGGCTTATCCATGCTAGGATGCACGCACAGGCACTAACTCTAGCAGTACTATCGGGTGCAGCTGCATATCACTATTATGAGAATCATCAAAAACCATTGGCAGATAGTTACACTTCAAATGTCACACCCACTGAGTTACTTGAATGGGAGCTTCATAGTCCTTTTTAA 294 0.4354 MEAVQSWVSNNKLTSIGALWASGIGASLVAYSRVKSPMKPSLRLIHARMHAQALTLAVLSGAAAYHYYENHQKPLADSYTSNVTPTELLEWELHSPF 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01522 97 Gene3D - 13 74 - -
Car05g01522 97 ProSiteProfiles HIG1 domain profile. 1 77 IPR007667 -
Car05g01522 97 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 4 73 IPR040153 -
Car05g01522 97 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 4 73 - -
Car05g01522 97 Pfam Hypoxia induced protein conserved region 11 61 IPR007667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01522 Car-Chr5 59609637 59610502 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01522 - - gmx:100500345 136.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01522 05 59609637 59610502 Car05g01522 05 59609637 59610502 ECH
Car05g01522 05 59609637 59610502 Car02g01757 02 46682431 46683602 PCT